Cloning and Expression Analysis of the Transcription Factor Gene StSwi4 of Setosphaeria turcica
BIAN Zhe1, ZHOU Qi-Hui1, LIU Yu-Wei1, GONG Xiao-Dong1, FAN Yong-Shan2, HAN Jian-Min1, GU Shou-Qin1,*, DONG Jin-Gao1,*
1 College of Life Sciences, Hebei Agricultural University/Key Laboratory of Plant Physiology and Molecular Pathology of Hebei Province/State Key Laboratory of North China Crop Improvement and Regulation, Baoding 071000, China; 2 Department of Life Sciences, Tangshan Normal University, Tangshan 063002, China
Abstract:CWI-MAPK (cell wall integrity-mitogen-activated protein kinase) cascade pathway is mainly involved in regulating the integrity of the cell wall, cell cycle and pathogenicity in phytopathogenic fungi. Swi4 is a key transcription factor downstream of the CWI-MAPK cascade. In Saccharomyces cerevisiae, the transcription factor ScSwi4 as a regulatory expression element participates in cell wall biosynthesis and cell cycle regulation, but the function of its homologous genes in filamentous pathogenic fungi is rarely reported. The northern leaf blight of corn is caused by Setosphaeria turcica. In this study, the StSwi4 gene of Setosphaeria turcica was cloned. The analysis of the gene sequence and the characteristics of the encoded protein showed that the full length of the DNA sequence of the gene was 2 247 bp, and the full length of the cDNA sequence was 2 037 bp, containing 3 exons and 2 introns, encoding 678 amino acids; StSwi4 protein contained 1 KilA-N conserved domain and 2 ANK conserved domains. The phylogenetic relationship of the proteins revealed that the StSwi4 protein of S. turcica shared closer evolutionary relationship with Alternaria gaisen, A. alternata, and S. solani. The expression results of StSwi4-His fusion protein by IPTG showed that the fusion protein could be expressed in Escherichia coli.The purified protein was further obtained by nickel column affinity chromatography. The expression patterns of StSwi4 gene at different developmental stages were analyzed by qPCR, and the highest expression level was found at conidial stage. This study clarified the structural characteristics and expression patterns of the transcription factor StSwi4 gene, and provides basic material for further revealing its molecular mechanism in the pathogenesis of pathogens.
[1] 程浩宇. 2009. 基于多种生物学数据预测基因转录调控关系[D]. 硕士学位论文, 上海交通大学, 导师: 刘琪, pp. 57-58. (Cheng H Y.2009. Prediction of transcription interactions based on diverse data sources[D]. Thesis for M.S., Shanghai Jiao Tong University, Suppervisor: Liu Q, pp.57-58.) [2] 巩校东, 张晓玉, 田兰, 等. 2014. 玉米大斑病菌MAPK超家族的全基因组鉴定及途径模型建立[J]. 中国农业科学, 47(09): 1715-1724. (Gong X D, Zhang X Y, Tian L, et al.2014. Genome-wide identification MAPK superfamily and establishment of the model of MAPK cascade pathway in Setosphaeria turcica[J]. Journal of Integrative Agriculture, 47(09): 1715-1724.) [3] 苏前富, 闫守荣, 王巍巍, 等. 2012. 东北春玉米区玉米栽培品种对大斑病抗性水平研究[J]. 玉米科学, 20(05): 135-138. (Su Q F, Yan S R, Wang W W, et al.2012. Resistance level of maize cultivars to northern maize leaf blight in northest of China[J]. Journal of Maize Sciences, 20(05): 135-138.) [4] 夏露. 2019. 马尔尼菲篮状菌Wsc3和MpkA基因功能的初步研究[D]. 硕士学位论文, 广西医科大学, 导师: 蓝秀万, pp. 51-62. (Xia L.2019. A preliminary study on the functions of Wsc3 and MpkA genes of Talaromyces marneffei[D]. Thesis for M.S., Guangxi Medical University, Suppervisor: Lan X W, pp. 51-62.) [5] 张海峰. 2011. 稻瘟病菌G蛋白及MAPK信号途径相关基因的功能分析[D]. 硕士学位论文, 南京农业大学, 导师: 郑小波, pp. 123-165. (Zhang H F.2011. Functioinal analysis of G protein and MAPK signaling pathway associated genes in Magnaporthe oryzae[D]. Thesis for M.S., Nanjing Agricultural University, Suppervisor: Zheng X B, pp. 123-165.) [6] 张昊. 2017. 轮枝镰孢(Fusarium verticillioides) bHLH类转录因子FvSWI4和FvSWI6生物学功能研究[D]. 硕士学位论文, 南京农业大学, 导师: 高学文, pp.37-42. (Zhang H.2017. Study on the biological function of FvSWI4 and FvSWI6 in Fusarium verticillioides[D]. Thesis for M.S., Nanjing Agricultural University, Suppervisor: Gao X W, pp. 37-42.) [7] 赵玉兰, 李盼, 魏宁, 等. 2019. 玉米大斑病菌亲环素基因的克隆及表达规律分析[J]. 玉米科学. 27(02): 29-35. (Zhao Yulan, Li Pan, Wei Ning, et al.2019. Cloning and expression analysis of Setosphaeria turcica cyclophilin gene[J]. Maize Science. 27(02): 29-35.) [8] 左建英, 李育才. 2011. 山西省玉米大斑病的发生特点和综合防治技术[J]. 内蒙古农业科技, (03): 123-128. (Zuo J Y, Li Y C. 2011. Occurrence characteristics and comprehensive control techniques of Setosphaeria turcica in Shanxi province[J]. Inner Mongolia Agricultural Science and Technology, (03): 123-128.) [9] Alic N, Higgins V J, Pichova A, et al.2003. Lipid hydroperoxides activate the mitogen-activated protein kinase Mpk1p in Saccharomyces cerevisiae[J]. The Journal of Biological Chemistry, 278(43): 41849-41855. [10] Bankapalli L K, Mishra R C, Saumya R.2017. VopE, a Vibrio cholerae typeⅢeffector, attenuates the activation of CWI-MAPK pathway in yeast model system[J]. Frontiers in Cellular and Infection Microbiology, 7: 1-17. [11] Chen R E, Thorner J.2007. Function and regulation in MAPK signaling pathways: Lessons learned from the yeast Saccharomyces cerevisiae[J]. BBA-Molecular Cell Research, 1773(8): 1311-1340. [12] Cid V J, Durán A, del Rey F, et al.1995. Molecular basis of cell integrity and morphogenesis in Saccharomyces cerevisiae[J]. Microbiological Reviews, 59(3): 345-386. [13] Connolly L A, Riccombeni A, Grózer Z, et al.2013. The APSES transcription factor Efg1 is a global regulator that controls morphogenesis and biofilm formation in Candida parapsilosis[J]. Molecular Microbiology, 90(1): 36-53. [14] Ethel Q, Carlos I J.2005. Functional connection between the Clb5 cyclin, the protein kinase C pathway and the Swi4 transcription factor in Saccharomyces cerevisiae[J]. Genetics, 171(4): 1485-1498. [15] Hamel L, Nicole M, Duplessis S, et al.2012. Mitogen-activated protein kinase signaling in plant-interacting fungi: Distinct messages from conserved messengers[J]. Plant Cell, 24(4): 1327-1351. [16] Heinisch J R.2005. Baker's yeast as a tool for the development of antifungal kinase inhibitors-targeting protein kinase C and the cell integrity pathway[J]. Biochimica et Biophysica Acta, 1754(1-2): 171-182. [17] Loredana A, Sonia C, Fiorella B, et al.2015. The transcription factor Swi4 is target for PKA regulation of cell size at the G1 to S transition in Saccharomyces cerevisiae[J]. Cell Cycle, 4(15): 2429-2438. [18] Poland J A, Bradbury P J, Buckler E S, et al.2011. Genome-wide nested association mapping of quantitative resistance to northern leaf blight in maize[J]. Proceedings of the National Academy of Sciences of USA, 108(17): 6893-6898. [19] Xu J.2000. MAP kinases in fungal pathogens[J]. Fungal Genetics and Biology, 31(3): 137-152. [20] Yang S, Sharrocks A D, Whitmarsh A J.2003. Transcriptional regulation by the MAP kinase signaling cascades[J]. Gene, 320: 3-21. [21] Yang W J, Wu H, Wang Z X, et al.2018. The APSES gene MrStuA regulates sporulation in Metarhizium robertsii[J]. Frontiers in Microbiology, 9: 1208.