Cloning and Characterization of R2R3-MYB Transcription Factor Gene GhTT2 in Brown Cotton (Gossypium hirsutum)
MEI Jun, MU Rong-Rong, NIU Qing-Qing, WANG Xiao-Li, ZHAO Yan-Yan, CAI Fang-Fang, SUN Yu-Qiang*
School of Life Sciences and Medicine/Plant Genomics & Molecular Improvement of Colored Fiber Laboratory, Zhejiang Sci-Tech University, Hangzhou 310018, China
Abstract:Natural colored cottons, including brown fiber cotton and green fiber cotton which can be spun into garments directly without chemical printing and dyeing, are special upland cottons (Gossypium hirsutum) with green environmental protection and high ecological benefits. Due to the accumulation of different anthocyanins, procyanidins and their derivatives in the fibers, colored cottons show different colors. It have been confirmed that proanthocyanidins and their derivatives are thought to be responsible for the color formation of brown fibers. Based on previous transcriptome data, this study cloned a R2R3-MYB (v-myb avian myeloblastosis viral oncogene homolog, MYB) transcription factor gene GhTT2 (transparent testa 2), which was predominantly expressed during the development stage of brown cotton fibers. The structure, expression pattern and subcellular localization of GhTT2 gene and coding protein were predicted and analyzed by phylogenetic tree construction, amino acid sequence multiple alignment, prokaryotic expression, qRT-PCR, tobacco (Nicotiana benthamiana) transient transformation, and yeast (Saccharomyces cerevisiae) hybridization assay. The results showed that the open reading frame of GhTT2 gene was 765 bp, encoding 254 amino acids, with predicted relative molecular mass 28.863 kD, isoelectric point 7.423, and a typical R2R3-MYB domain. The prokaryotic expression analysis showed that expression of GhTT2 could be efficiently induced under the condition of 37 ℃ and 1 mmol/L isopropyl β-D-thiogalactoside (IPTG). The results of qRT-PCR showed that, compared with white cotton, GhTT2 was predominantly expressed during the development stage of brown cotton fibers, and its expression in fibers was significantly higher than that in other tissues. The recombinant protein GhTT2-GFP was located in the nucleus, which conformed to the characteristics of typical transcription factors. Yeast transformation test showed that GhTT2 protein had obvious transcriptional activation activity. The study provides basic material for further verifying the biological function of GhTT2 in the color formation of brown fibers and the improvement of the color diversity of colored cotton fibers.
梅俊, 慕蓉蓉, 牛晴晴, 王晓丽, 赵艳艳, 蔡芳芳, 孙玉强. 棕色棉R2R3-MYB类转录因子基因GhTT2的克隆及特征分析[J]. 农业生物技术学报, 2022, 30(11): 2099-2107.
MEI Jun, MU Rong-Rong, NIU Qing-Qing, WANG Xiao-Li, ZHAO Yan-Yan, CAI Fang-Fang, SUN Yu-Qiang. Cloning and Characterization of R2R3-MYB Transcription Factor Gene GhTT2 in Brown Cotton (Gossypium hirsutum). 农业生物技术学报, 2022, 30(11): 2099-2107.
[1] 杜雄明, 刘方, 王坤波, 等. 2017. 棉花种质资源收集鉴定与创新利用[J]. 棉花学报, 29(S1): 51-61. (Du X M, Liu F, Wang K B, et al.2017. Collection, evaluation and utilization of cotton germplasm[J]. Cotton Science, 29(S1): 51-61.) [2] 喻树迅. 2013. 我国棉花生产现状与发展趋势[J]. 中国工程科学, 15(04): 9-13. (Yu S X.2013. Present situation and development trend of cotton production in China[J]. Strategic Study of CAE, 15(04): 9-13.) [3] 袁景丽, 郑红丽, 梁先利, 等. 2021. 花青素代谢对陆地棉叶片和纤维色泽呈现的影响[J]. 中国农业科学, 54(09): 1847-1855. (Yuan J L, Zheng H L, Liang X L, et al.2021. Influence of anthocyanin biosynthesis on leaf and iber color of Gossypium hirsutum L.[J]. Scientia Agricultura Sinica, 54(09): 1847-1855.) [4] 张斌, 刘金海, 冯晓辉. 2011. 印染废水污染现状及其处理技术的发展[J]. 科技信息, (5): 796-797. (Zhang B, Liu J H, Feng X H. 2011. The pollution situation and treating technology development of dyeing wastewater[J]. Science & Technology Information, (5): 796-797.) [5] 赵学亮, 王姝懿, 孙柯, 等. 2020. 捻转血矛线虫ABC转运蛋白的基因克隆、原核表达及纯化[J]. 农业生物技术学报, 28(10): 1830-1836. (Zhao X L, Wang S Y, Sun K, et al.2020. Gene cloning, prokaryotic expression and purification of ABC transporter in Haemonchus contortus[J]. Journal of Agricultural Biotechbology, 28(10): 1830-1836.) [6] Dubos C, Stracke R, Grotewold E.2010. MYB transcription factors in Arabidopsis[J]. Trends in Plant Science, 15(10): 573-581. [7] Feng H J, Li Y J, Wang S F, et al.2014. Molecular analysis of proanthocyanidins related to pigmentation in brown cotton fibre (Gossypium hirsutum L.)[J]. Journal of Experimental Botany, 65(20): 5759-5769. [8] Feng H J, Tian X, Liu Y, et al.2013. Analysis of flavonoids and the flavonoid structural genes in brown fiber of upland cotton[J]. PLOS ONE, 8(3): e58820. [9] Gao J F, Shen L, Yuan J L, et al.2019. Functional analysis of GhCHS, GhANR and GhLAR in colored fiber formation of Gossypium hirsutum L.[J]. BMC Plant Biology, 19(1): 455. [10] Hinchliffe D J, Condon B D, Thyssen G, et al.2016. The GhTT2_A07 gene is linked to the brown colour and natural flame retardancy phenotypes of Lc1 cotton (Gossypium hirsutum L.) fibres[J]. Journal of Experimental Botany, 67(18): 5461-5471. [11] Jacob P, Brisou G, Dalmais M, et al.2021. The seed development factors TT2 and MYB5 regulate heat stress response in Arabidopsis[J]. Genes, 12(5): 746. [12] Li Y J, Zhang X Y, Wang F X, et al.2013. A comparative proteomic analysis provides insights into pigment biosynthesis in brown color fiber[J]. Journal of Proteomics, 78: 374-388. [13] Liu H F, Luo C, Song W, et al.2018. Flavonoid biosynthesis controls fiber color in naturally colored cotton[J]. PeerJ, 6: e4537. [14] Lu N, Roldan M, Dixon R A.2017. Characterization of two TT2-type MYB transcription factors regulating proanthocyanidin biosynthesis in tetraploid cotton, Gossypium hirsutum[J]. Planta, 246(2): 323-335. [15] Roy S.2015. Function of MYB domain transcription factors in abiotic stress and epigenetic control of stress response in plant genome[J]. Plant Signaling & Behavior, 11(1): 1559-2324. [16] Sharma S B, Dixon R A.2005. Metabolic engineering of proanthocyanidins by ectopic expression of transcription factors in Arabidopsis thaliana[J]. Plant Journal, 44(1): 62-75. [17] Shen Y X, Sun T T, Pan Q, et al.2019. RrMYB5- and RrMYB10-regulated flavonoid biosynthesis plays a pivotal role in feedback loop responding to wounding and oxidation in Rosa rugosa[J]. Plant Biotechnol Journal, 17(11): 2078-2095. [18] Stracke R, Werber M, Weisshaar B.2001. The R2R3-MYB gene family in Arabidopsis thaliana[J]. Current Opinion in Plant Biology, 4(5): 447-456. [19] Sun J, Sun Y Q, Zhu Q H.2021. Breeding next-generation naturally colored cotton[J]. Trends in Plant Science, 26(6): 539-542. [20] Sun S, Xiong X P, Zhu Q, et al.2019. Transcriptome sequencing and metabolome analysis reveal genes involved in pigmentation of green-colored cotton fibers[J]. International Journal of Molecular Sciences, 20(19): 4838. [21] Wang J L, Chen S S, Jiang N, et al.2019a. Spliceosome disassembly factors ILP1 and NTR1 promote miRNA biogenesis in Arabidopsis thaliana[J]. Nucleic Acids Research, 47(15): 7886-7900. [22] Wang L, Tang W, Hu Y, et al.2019b. A MYB/bHLH complex regulates tissue-specific anthocyanin biosynthesis in the inner pericarp of red-centered kiwifruit Actinidia chinensis cv. Hongyang[J]. Plant Journal, 99(2): 359-378. [23] Wang L J, Ran L Y, Hou Y S, et al.2017. The transcription factor MYB115 contributes to the regulation of proanthocyanidin biosynthesis and enhances fungal resistance in poplar[J]. New Phytologist, 215(1): 351-367. [24] Yan Q, Wang Y, Li Q, et al.2018. Up-regulation of GhTT2-3A in cotton fibres during secondary wall thickening results in brown fibres with improved quality[J]. Plant Biotechnol Journal, 16(10): 1735-1747.