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大白菜败蕾相关基因的cDNA-AFLP差异表达分析
张鲁刚1,贾晋2
1. 西北农林科技大学园艺学院,陕西杨凌712100
2. 西北农林科技大学西林校区园艺学院白菜课题组
cDNA-AFLP differential expression analysis of genes related with aborting bud in Chinese cabbage
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摘要 摘要:以大白菜败蕾到正常花蕾的10个连续时期的花蕾为材料,采用cDNA-AFLP技术和生物信息学分析等方法研究了败蕾过程中的基因表达差异,获得了192个大白菜败蕾相关差异表达片段,随机挑选88个序列进行测序,获得72个新表达序列标签(ESTs)。根据生物信息学分析结果,将其分为能量和新陈代谢、膜和运输、转录和翻译、氨基酸合成和加工、信号传导、防御及分类不确定7类。此外,有5个ESTs为大白菜败蕾材料中新发现的,已在GenBank进行了登录,登录号分别为:GD185906、GD185907、GD185908、GD185909和GD185910。大白菜败蕾相关基因表达序列标签的成功获得,为研究大白菜败蕾机理奠定了基础,也是分离新基因不可多得的重要资源。
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张鲁刚
贾晋
关键词 大白菜 败蕾cDNA-AFLPESTs    
Abstract:Abstract: cDNA-AFLP technology and bioinformatics analysis was used to analyze gene expression difference at 10 consecutive periods bud from bud aborted to normal bud in Chinese cabbage, 192 differentially expressed sequences were obtained, in which 88 sequences were chosen randomly to sequence, 72 novel expressed sequence tags (ESTs) were obtained after sequencing. By bioinformatics analyzing, the ESTs were divided into seven types, such as energy and metabolism, membrane and transport, transcript and translation, amino acid synthesizing and processing, signal conduction, and Unclear classified et al, moreover, 5 ESTs were newly found in Chinese cabbage bud aborting and had been entered to GenBank, their entering number were GD185906、GD185907、GD185908、GD185909 and GD185910 respectively. The acquirement of ESTs related with Chinese cabbage aborted bud may be helpful to elucidate the mechanism of Chinese cabbage aborted bud, and will provide important resource for finding novel gene.
Key wordsChinese cabbage    bud aborting    cDNA-AFLP    ESTs
收稿日期: 2009-04-09     
通讯作者: 张鲁刚   
引用本文:   
张鲁刚1,贾晋2. 大白菜败蕾相关基因的cDNA-AFLP差异表达分析[J]. , 2010, 18(3): 489-492.
链接本文:  
http://journal05.magtech.org.cn/Jwk_ny/CN/     或     http://journal05.magtech.org.cn/Jwk_ny/CN/Y2010/V18/I3/489
 
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