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2025年4月3日 星期四
农业生物技术学报  2021, Vol. 29 Issue (10): 2008-2015    DOI: 10.3969/j.issn.1674-7968.2021.10.015
  研究论文与报告 本期目录 | 过刊浏览 | 高级检索 |
伪狂犬病病毒Ⅱ型感染PK-15细胞的转录组学分析
李海敏, 俞天奇, 金玉兰, 顾金燕*, 周继勇
浙江大学 动物医学中心/农业农村部动物病毒学重点实验室,杭州 310058
Transcriptomic Analysis of PK-15 Cells Infected with Pseudorabies virus TypeⅡ
LI Hai-Min, YU Tian-Qi, JIN Yu-Lan, GU Jin-Yan*, ZHOU Ji-Yong
MOA Key Laboratory of Animal Virology/Center of Veterinary Science, Zhejiang University, Hangzhou 310058, China
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摘要 伪狂犬病病毒(Pseudorabies virus, PRV)感染猪(Sus scrofa)可引起烈性接触性传染病,即伪狂犬病(Pseudorabies, PR),临床上主要通过疫苗免疫进行防控。PRV变异株(PRVⅡ型)的流行使传统疫苗失去有效保护。近年来出现PRV跨宿主感染人(Homo sapiens)的案例,更使PRV成为全球公共卫生威胁,但其感染致病机制仍不完全清楚。为从分子水平上全面了解PRV感染宿主细胞引起的变化,本研究以PRV Ⅱ型毒株PRV-DX感染猪肾细胞PK-15,通过高通量测序获得PRV感染后全部的细胞差异转录组数据,并对差异表达基因进行功能富集。结果表明,PRV-DX感染PK-15可引起3 595条基因表达上调、3 604条基因表达下调。通过qPCR验证随机选择的12条差异表达基因,其变化趋势与转录组数据一致。GO注释和KEGG信号通路富集将差异表达基因聚焦在代谢、基因表达、免疫等信号通路。本研究为深入解析PRV感染的致病机制提供了重要基础数据及研究方向。
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李海敏
俞天奇
金玉兰
顾金燕
周继勇
关键词 伪狂犬病病毒Ⅱ型(PRVⅡ)高通量测序差异转录组    
AbstractPseudorabies virus (PRV) infection causes Pseudorabies (PR), which is an acute contact contagious disease in pigs (Sus scrofa). Vaccines are broadly used to control PR. But immunity failures commonly happen due to the prevalence of PRV variant (PRV typeⅡ). In recent years, cases of PRV infection in humans (Homo sapiens) made PRV a global public health threat. However, the pathogenesis of PRV remains vague. To fully understand the molecular change of host cells caused by PRV infection, the PRV typeⅡstrain PRV-DX was used to infect pig kidney cells PK-15 to explore the differential transcriptome by high throughput sequencing. Results showed that 3 595 genes were up-regulated and 3 604 genes were down-regulated. Twelve differentially expressed genes were randomly selected for qPCR verification, and the changing trend was consistent with that of transcriptome data. GO annotation and KEGG signaling pathway enrichment indicated that the differentially expressed genes mainly focused on the pathways such as metabolism, gene expression and immunity. The present study provides important basic data and research direction for further understanding the pathogenic mechanism of PRV infection.
Key wordsPseudorabies virus typeⅡ(PRVⅡ)    High-throughput sequencing    Differential transcriptome
收稿日期: 2021-03-09     
ZTFLH:  S855.3  
基金资助:浙江省重点研发计划(2020C02011)
通讯作者: * gujinyan@zju.edu.cn   
引用本文:   
李海敏, 俞天奇, 金玉兰, 顾金燕, 周继勇. 伪狂犬病病毒Ⅱ型感染PK-15细胞的转录组学分析[J]. 农业生物技术学报, 2021, 29(10): 2008-2015.
LI Hai-Min, YU Tian-Qi, JIN Yu-Lan, GU Jin-Yan, ZHOU Ji-Yong. Transcriptomic Analysis of PK-15 Cells Infected with Pseudorabies virus TypeⅡ. 农业生物技术学报, 2021, 29(10): 2008-2015.
链接本文:  
http://journal05.magtech.org.cn/Jwk_ny/CN/10.3969/j.issn.1674-7968.2021.10.015     或     http://journal05.magtech.org.cn/Jwk_ny/CN/Y2021/V29/I10/2008
 
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