Isolation of HcNAC1 Transcription Factor Gene and Its Expression Patterns Under Drought Stress in Kenaf (Hibiscus cannabinus)
DENG Jie-Lou1, ZHANG Gao-Yang1,*, ZHANG Zong-Liang1, ZHANG Chao1, XU Jian-Tang2, QI Jian-Min2, WU Ying-Bao2, WANG Gang1
1 College of Life Sciences, Shangrao Normal University, Shangrao 334001, China; 2 College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou 350002, China
Abstract:Drought is one of the abiotic limiting factors that seriously affect the growth of crops. NAC (NAM, ATAF and CUC) transcription factor is one type of transcription factors in plants, it play an important role in regulating plant growth, development and response to abiotic stress. In order to study the regulation function of NAC transcription factor in drought stress of kenaf (Hibiscus cannabinus), a NAC like gene was isolated from kenaf transcriptome database, named HcNAC1 gene (GenBank No. MT799841). The coding sequence of HcNAC1 contained 1 044 bp, encoding 347 amino acids, protein molecular weight 38.77 kD, isoelectric point was 8.78. The HcNAC1 genes with NAM/NAC family conservative area, containing about 160 amino acid conservative in the protein N-terminal structural domain, with 2 nuclear localization signal (NLS) sequence. Phylogenetic tree analysis showed that kenaf HcNAC1 had the closest evolutionary relationship with Hibiscus syriacus. The expression level in different tissues and within 24 h of drought stress was detected by reverse transcription PCR (RT-PCR) and qRT-PCR, research results showed that HcNAC1 gene was expressed in root, stem, leaf, flower and fruit, HcNAC1 gene was expressed under PEG6000 stress and had most expression level at 12 h, and then the expression level gradually decreased. HcNAC1 played an important regulatory role in response to drought stress. The study explored the correlation between HcNAC1 expression and drought stress. and could provide a reference for further research on the molecular mechanism of HcNAC1 transcription factors involved in drought stress of kenaf.
[1] 邓接楼, 张高阳, 黄思齐, 等. 2017. 红麻过氧化物酶基因分离、过表达载体构建及转化拟南芥分析[J]. 基因组学与应用生物学, 36(4): 1570-1574. (Deng J L, Zhang G Y, Huang S Q, et al.2017. The analysis of peroxidase gene isolation and over-expression vector construction in kenaf and its transformation in Arabidopsis thaliana[J]. Genomics and Applied Biology, 36(4): 1570-1574.) [2] 黄娟, 邓娇, 朱丽伟, 等. 2017. 植物种子发育相关NAG家族转录因子研究进展[J]. 种子, 36(11): 51-55. (Huang J, Deng J, Zhu W L, et al.2017. Progress of NAC transcription factor relative to plant seed development[J].Seed, 36(11): 51-55.) [3] 任美艳. 2019. 沙冬青三个抗逆相关NAC转录因子基因的克隆与功能研究[D].博士学位论文, 内蒙古农业大学, 导师: 王茅雁, pp. 18-78. (Ren M Y.2019. Cloning and Functional Study of three NAC transcription factor genes from Ammopiptanthus mongolicus[D]. Thesis for Ph.D., Inner Monglia Agricultural University, Supervisor: Wang M Y, pp. 18-78.) [4] 赵钟毓, 侯丹, 胡秋涛, 等. 2020. 毛竹PeNAC047基因的克隆与表达分析[J]. 农业生物技术学报, 28(1): 58-71. (Zhao Z Y, Hou D, Hu Q T, et al.2020. Cloning and expression analysis of PeNAC047 gene from Phyllostachys edulis[J]. Journal of Agricultural Biotechnology, 28(1): 58-71.) [5] Aida M, Ishida T, Fukaki H, et al.1997. Genes involved in organ separation in Arabidopsis: An analysis of the cup-shaped cotyledon mutant[J]. The Plant Cell, 9(6): 841-857. [6] Chung P J, Jung H, Choi Y D, et al.2018. Genome-wide analyses of direct target genes of four rice NAC-domain transcription factors involved in drought tolerance[J]. BMC Genomics, 19(1): 40. [7] Hu H H, Dai M Q, Yao J L, et al.2006. Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice[J]. Proceedings of the National Academy of Sciences of USA, 103(35): 12987-12992. [8] Li H, Li D F, Chen A G, et al.2017. RNA-seq for comparative transcript profiling of kenaf under salinity stress[J]. Journal of Plant Research, 130(2): 365-372. [9] Mao X, Zhang H, Qian X, et al.2012. TaNAC2, a NAC-type wheat transcription factor conferring enhanced multiple abiotic stress tolerances in Arabidopsis[J]. Journal of Experimental Botany, 63(8): 2933-2946. [10] Nuruzzaman M, Manimekalai R, Sharoni A M, et al.2010. Genome-wide analysis of NAC transcription factor family in rice[J]. Gene, 465(1-2): 30-44. [11] Ooka H, Satoh K, Doi K, et al. 2003. Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana[J]. DNA Research, 10(6): 239-47. [12] Sperotto R A, Ricachenevsky F K, Duarte G L, et al.2009. Identification of up-regulated genes in flag leaves during rice grain filling and characterization of OsNAC5, a new ABA-dependent transcription factor[J]. Planta, 230(5): 985-1002. [13] Seok H Y, Woo D H, Nguyen L V, et al.2017. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response[J]. Planta, 245(2): 329-341. [14] Venkategowda R, Muthappa S K, Karaba N N, et al.2012. Expression of a finger millet transcription factor, EcNAC1, in Tobacco confers abiotic stress tolerance[J]. PLOS ONE, 7(7): e40397. [15] Wang, J Y, Wang, J P, He Y.et al.2013. A populus euphratica NAC protein regulating Na+/K+ homeostasis improves salt tolerance in Arabidopsis thaliana[J]. Gene, 521(2): 265-273. [16] Wang X, Basnayake B M, Zhang H, et al.2009. The Arabidopsis ATAF1, a NAC transcription factor, is a negative regulator of defense responses against necrotrophic fungal and bacterial pathogens[J]. Molecular Plant-Microbe Interactions, 22(10): 1227-38.