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2025年5月8日 星期四
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基于BOX-PCR和REP-PCR技术青枯雷尔氏菌遗传多样性分析
林海云1,车建美2,刘波1,郑雪芳3,肖荣凤
Genetic Diversity Analysis of Ralstonia solanacearum Based on BOX-PCR and REP-PCR
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摘要 青枯雷尔氏菌(Ralstonia solanacearum)能够对许多重要作物引起致命性萎蔫病害,广泛分布在热带、亚热带以及温带地区。研究青枯雷尔氏菌的遗传多样性对于了解青枯病的发生和流行具有十分重要的意义。本研究利用青枯雷尔氏菌特异性引物鉴定84株来自福建地区不同寄主的青枯雷尔氏菌,结果表明,这些菌株均在504 bp位置出现特异性条带。同时采用BOX插入因子PCR(BOX-PCR)和重复基因外回文序列PCR(REP-PCR)对这些菌株进行基因多样性研究,基于它们所扩增出的基因指纹图谱表明,BOX-PCR扩增出19条特异性条带,REP-PCR扩增出20条特异性条带。系统聚类结果表明,青枯雷尔氏菌的遗传分化与寄主作物和地理来源都存在相关性,其中,寄主植物是在遗传差异中起主导作用。进一步分析可知,地域性的差异主要由BOX-PCR提供,寄主间的差异主要由REP-PCR提供。不同地理来源的青枯雷尔氏菌在BOX-PCR中可扩增出各自特异性条带,在REP-PCR中同样具有与各个寄主相对应的特异性条带,利用这些特异性条带可以很容易区分不同寄主以及来源的青枯雷尔氏菌。BOX-PCR和REP-PCR多态性分析技术可为我国青枯雷尔氏菌基因多样性的研究提供另一条途径。
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林海云
车建美
刘波
郑雪芳
肖荣凤
关键词 青枯雷尔氏菌多态性BOX-PCRREP-PCR菌株鉴定    
Abstract:Ralstonia solanacearum causes a lethal wilting disease on many important crops in tropical, subtropical and warm regions in the world. The research of genetic diversity of R. solanacearum plays an important part in knowing the appearance and prevalence of bacterial wilt diseases. The special primer was used to identify R. solanacearum strains, in which 84 strains of R. solanacearum from different host plants in the Fujian Province were identified with a specific band in the location of 504 bp. Meanwhile, the genetic diversity of these R. solanacearum strains was assessed by Box element polymerase chain reaction (BOX-PCR) and Repetitive extragenic palindromic polymerase chain reaction (REP-PCR) method. Based on their genomic fingerprints, 19 specific bands were amplified in the BOX-PCR and 20 specific bands were amplified in the REP-PCR. The cluster analysis showed that the genetic diversity of R. solanacearum was concerned with geographic origin and host plants, respectively. The different host plants played a leading role in the genetic difference of R. solanacearum, while the difference of regions was mainly provided by the BOX-PCR, and the difference of host plants was mainly provided by REP-PCR. At the same time, there were some special fragments of R. Solanacearum from different regions in BOX-PCR patterns. Moreover, there were also some special fragments of R. Solanacearum from different host in REP-PCR patterns. Therefore, R. Solanacearum from different regions and hosts could be identified by these special fragments. All of results indicate that REP-PCR and BOX-PCR can provide an alternative way for the study of genetic diversity of R. solanacearum.
Key wordsRalstonia solanacearum    Genetic diversity    BOX-PCR    REP-PCR    Strain identification
收稿日期: 2011-05-31     
通讯作者: 刘波   
引用本文:   
林海云1,车建美2,刘波1,郑雪芳3,肖荣凤. 基于BOX-PCR和REP-PCR技术青枯雷尔氏菌遗传多样性分析[J]. , 2011, 19(6): 1099-1109.
链接本文:  
http://journal05.magtech.org.cn/Jwk_ny/CN/     或     http://journal05.magtech.org.cn/Jwk_ny/CN/Y2011/V19/I6/1099
 
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