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2025年8月3日 星期日
  2018, Vol. 26 Issue (11): 1938-1948    
  研究论文与报告 本期目录 | 过刊浏览 | 高级检索 |
鸽UCP3基因克隆、序列特征及组织表达分析
田勇1,李国勤1,陶争荣1,沈军达1,陈黎1,曾涛2,卢立志1
1. 浙江省农业科学院
2. 浙江省农业科学院 畜牧兽医研究所
Cloning, Sequence Characterization and Tissue Expression Analysis of UCP3 Gene in Pigeon (Columba livia)
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摘要 解偶联蛋白3(uncoupling protein 3, UCP3)是线粒体内重要的转运蛋白,属于线粒体阴离子转运蛋白超家族的一员。哺乳动物UCP3参与多种生理过程,包括生热作用、活性氧生成、脂类代谢和胰岛素分泌等。目前,关于该基因在鸽(Columba livia)上的研究报道很少。本研究以白羽王鸽为研究对象,利用cDNA末端快速扩增(rapid amplification of cDNA ends, RACE)技术,克隆UCP3基因的全长cDNA序列,运用生物信息学的方法对UCP3蛋白结构域、氨基酸同源性等进行分析;采用qRT-PCR技术检测UCP3基因在28日龄鸽不同组织中的表达情况。RACE结果表明,鸽UCP3基因(GenBank No. KU166860.1)cDNA 全长1 413 bp,包含75 bp的5'端非翻译区,414 bp的3'端非翻译区和924 bp的开放阅读框(open reading frame, ORF),共编码307个氨基酸。蛋白结构域分析表明,鸽UCP3蛋白具有3个完整的线粒体载体(mitochondrial carrier, Mito_carr)结构域。序列比对显示,鸽与其他鸟类的UCP3氨基酸序列同源性较高(90%~93%),而与哺乳动物(72%~75%)、斑马鱼(Danio rerio)和爪蟾(Xenopus laevis)的同源性较低分别为70%和69%。构建的系统发生树显示,鸟类、哺乳动物、斑马鱼和两栖类的爪蟾分别形成一个分支,且在鸟类分支中,与鸽的聚类顺序较近的物种为鸭(Anas platyrhynchos),该结果与这些物种在生物学上的分类基本一致。qRT-PCR结果显示,UCP3 mRNA所检测的白羽王鸽多个组织器官中都有表达,其中以肺组织的表达量为最高,显著高于其他组织(P<0.05),脾脏和肾脏的表达水平次之,肌肉和心脏组织中有少量表达,肝脏中的表达丰度最低。本研究为进一步探讨禽类UCP3基因的生物学功能提供了理论依据。
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田勇
李国勤
陶争荣
沈军达
陈黎
曾涛
卢立志
关键词 解偶联蛋白3基因(UCP3)克隆生物信息学mRNA表达    
Abstract:The uncoupling protein 3 (UCP3) is a member of the mitochondrial anion carrier family, which play important roles in several physiological processes, including thermogenesis, reactive oxygen species generation, lipid metabolism and insulin secretion. Although the roles of UCP3 gene are well understood in mammals, little is known about it in pigeon (Columba livia). In this study, ten white king pigeons were selected as the research object. The full-length cDNA sequence of UCP3 gene was cloned from spleen by rapid amplification of cDNA ends (RACE) and analyzed using bioinformatics tools. The distribution and expression level of pigeon UCP3 in different tissues were determined by qRT-PCR. The results showed that the full-length of pigeon UCP3 (GenBank No. KU166860.1) cDNA was of 1 413 bp including a 924 bp open reading frame (ORF), 75 bp 5'UTR and 414 bp 3'UTR. The ORF encoded polypeptides of 307 amino acids. Structure prediction showed that there were three mitochondrial carrier motifs in the pigeon UCP3 protein. The deduced amino acid sequence of pigeon UCP3 shared identity of 90%~93% with other birds, 72%~75% with mammals, 70% with Danio rerio, and 69% with Xenopus laevis. The phylogenetic relationship analysis indicated that birds, mammals, fish and amphibians each formed a branch. And in the bird branch, Columba livia was closely related with Anas platyrhynchos. These results were similar to the biological classification of different species. The results of qRT-PCR showed that pigeon UCP3 were expressed in all 6 tissues examined. The UCP3 mRNA expression levels in lung were highest, which were significantly higher than that in other tissues (P<0.05), followed by spleen and kidney, and relative lower expression was detected in muscle and heart, and the lowest expression was found in liver. The results of this work may provide a theoretical basis for the further study of its function in poultry.
Key wordsPigeon    Uncoupling protein 3 gene (UCP3)    Clone    Bioinformatics    mRNA expression
收稿日期: 2018-04-03      出版日期: 2018-10-24
基金资助:浙江省农业(畜禽)新品种选育重大科技专项;浙江省农科院鸽产业团队科技特派员项目
通讯作者: 卢立志     E-mail: llz@163.com;lulizhibox@163.com
引用本文:   
田勇 李国勤 陶争荣 沈军达 陈黎 曾涛 卢立志. 鸽UCP3基因克隆、序列特征及组织表达分析[J]. , 2018, 26(11): 1938-1948.
链接本文:  
http://journal05.magtech.org.cn/Jwk_ny/CN/     或     http://journal05.magtech.org.cn/Jwk_ny/CN/Y2018/V26/I11/1938
 
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