Abstract:Hybridization chain reaction (HCR) is a kind of self-assembly reaction which can be carried out without enzyme participation at room temperature. It is a new type of signal amplification method. It is not only widely used in the common areas, such as colorimetric, fluorescent and electrochemical method, but also in the new field of Chemiluminescence, Electrochemical luminescence, Photochemiluminescence and Raman spectra and so on. So biosensor based on HCR can be used to detect nucleic acids, proteins, cells, small molecules and other biological molecules. This paper reviews the application of the HCR-based biosensors in the biosensing field in the nearly four years, and the future development trend is prospected.
参考文献Barany F. Genetic disease detection and DNA amplification using cloned thermostable ligase[J]. Proceedings of the National Academy of Sciences, 1991, 88(1): 189-193.Bi S, Zhao T, Luo B, et al. Hybridization chain reaction-based branched rolling circle amplification for chemiluminescence detection of DNA methylation[J]. Chemical Communications, 2013, 49(61): 6906-6908.Chang C C, Chen C Y, Chuang T L, et al. Aptamer-based colorimetric detection of proteins using a branched DNA cascade amplification strategy and unmodified gold nanoparticles[J]. Biosensors and Bioelectronics, 2016, 78: 200-205.Chen C, Liu Y, Zheng Z, et al. A new colorimetric platform for ultrasensitive detection of protein and cancer cells based on the assembly of nucleic acids and proteins[J]. Analytica chimica acta, 2015, 880: 1-7.Chen Y, Xu J, Su J, et al. In situ hybridization chain reaction amplification for universal and highly sensitive electrochemiluminescent detection of DNA[J]. Analytical chemistry, 2012, 84(18): 7750-7755.Dirks R M, Pierce N A. Triggered amplification by hybridization chain reaction[J]. Proceedings of the National Academy of Sciences of the United States of America, 2004, 101(43): 15275-15278.Dong J, Cui X, Deng Y, et al. Amplified detection of nucleic acid by G-quadruplex based hybridization chain reaction[J]. Biosensors and Bioelectronics, 2012, 38(1): 258-263.Gao Z, Tansil N C. An ultrasensitive photoelectrochemical nucleic acid biosensor[J]. Nucleic acids research, 2005, 33(13): e123-e123.Ghosh S K, Pal T. Interparticle coupling effect on the surface plasmon resonance of gold nanoparticles: from theory to applications[J]. Chemical reviews, 2007, 107(11): 4797-4862.Guo Q, Yang X, Wang K, et al. Sensitive fluorescence detection of nucleic acids based on isothermal circular strand-displacement polymerization reaction[J]. Nucleic acids research, 2009: gkn1024.Harper M M, McKeating K S, Faulds K. Recent developments and future directions in SERS for bioanalysis[J]. Physical Chemistry Chemical Physics, 2013, 15(15): 5312-5328.Hou T, Li W, Liu X, et al. Label-Free and Enzyme-Free Homogeneous Electrochemical Biosensing Strategy Based on Hybridization Chain Reaction: A Facile, Sensitive, and Highly Specific MicroRNA Assay[J]. Analytical chemistry, 2015, 87(22): 11368-11374.Huang J, Wu Y, Chen Y, et al. Pyrene‐excimer probes based on the hybridization chain reaction for the detection of nucleic acids in complex biological fluids[J]. Angewandte Chemie International Edition, 2011, 50(2): 401-404.Ikbal J, Lim G S, Gao Z. The hybridization chain reaction in the development of ultrasensitive nucleic acid assays[J]. TrAC Trends in Analytical Chemistry, 2015, 64: 86-99.Jie G, Jie G. Sensitive electrochemiluminescence detection of cancer cells based on a CdSe/ZnS quantum dot nanocluster by multibranched hybridization chain reaction on gold nanoparticles[J]. RSC Advances, 2016, 6(29): 24780-24785.Kanjanawarut R, Su X. Colorimetric detection of DNA using unmodified metallic nanoparticles and peptide nucleic acid probes[J]. Analytical chemistry, 2009, 81(15): 6122-6129.Katilius E, Katiliene Z, Woodbury N W. Signaling aptamers created using fluorescent nucleotide analogues[J]. Analytical chemistry, 2006, 78(18): 6484-6489.Kelley S O, Barton J K, Jackson N M, et al. Electrochemistry of methylene blue bound to a DNA-modified electrode[J]. Bioconjugate chemistry, 1997, 8(1): 31-37.Kerman K, Ozkan D, Kara P, et al. Voltammetric determination of DNA hybridization using methylene blue and self-assembled alkanethiol monolayer on gold electrodes[J]. Analytica Chimica Acta, 2002, 462(1): 39-47.Li C, Wang H, Shen J, et al. Cyclometalated Iridium Complex-Based Label-Free Photoelectrochemical Biosensor for DNA Detection by Hybridization Chain Reaction Amplification[J]. Analytical chemistry, 2015, 87(8): 4283-4291.Li Z, Miao X, Xing K, et al. Enhanced electrochemical recognition of double-stranded DNA by using hybridization chain reaction and positively charged gold nanoparticles[J]. Biosensors and Bioelectronics, 2015, 74: 687-690.Liu P, Yang X, Sun S, et al. Enzyme-free colorimetric detection of DNA by using gold nanoparticles and hybridization chain reaction amplification[J]. Analytical chemistry, 2013, 85(16): 7689-7695.Liu Y, Luo M, Yan J, et al. An ultrasensitive biosensor for DNA detection based on hybridization chain reaction coupled with the efficient quenching of a ruthenium complex to CdTe quantum dots[J]. Chemical Communications, 2013, 49(67): 7424-7426.Lizardi P M, Huang X, Zhu Z, et al. Mutation detection and single-molecule counting using isothermal rolling-circle amplification[J]. Nature genetics, 1998, 19(3): 225-232.MullisK F F. Specific amplification of DNA in vitro: The polymerase chain reaction[J]. Cold Spring Harb Symp Quant Biol, 1986, 51(1): 263-273.Peng J, Gao W, Gupta B K, et al. Graphene quantum dots derived from carbon fibers[J]. Nano letters, 2012, 12(2): 844-849.Ronkainen N J, Halsall H B, Heineman W R. Electrochemical biosensors[J]. Chemical Society Reviews, 2010, 39(5): 1747-1763.Saiki R K, Gelfand D H, Stoffel S, et al. Primer-directed enzymatic amplification of DNA[J]. Science, 1988, 239: 487-491.Shen J, Zhu Y, Yang X, et al. Graphene quantum dots: emergent nanolights for bioimaging, sensors, catalysis and photovoltaic devices[J]. Chemical Communications, 2012, 48(31): 3686-3699.Shi W, Wang Q, Long Y, et al. Carbon nanodots as peroxidase mimetics and their applications to glucose detection[J]. Chemical Communications, 2011, 47(23): 6695-6697.Storhoff J J, Lazarides A A, Mucic R C, et al. What controls the optical properties of DNA-linked gold nanoparticle assemblies?[J]. Journal of the American Chemical Society, 2000, 122(19): 4640-4650.Teo A K L, Le Lim C, Gao Z. The development of electrochemical assays for microRNAs[J]. Electrochimica Acta, 2014, 126: 19-30.Trifonov A, Sharon E, Tel-Vered R, et al. Application of the Hybridization Chain Reaction on Electrodes for the Amplified and Parallel Electrochemical Analysis of DNA[J]. The Journal of Physical Chemistry C, 2016.Tu W, Dong Y, Lei J, et al. Low-potential photoelectrochemical biosensing using porphyrin-functionalized TiO2 nanoparticles[J]. Analytical chemistry, 2010, 82(20): 8711-8716.Walker G T, Fraiser M S, Schram J L, et al. Strand displacement amplification—an isothermal, in vitro DNA amplification technique[J]. Nucleic acids research, 1992, 20(7): 1691-1696.Wang X, Jiang A, Hou T, et al. Enzyme-free and label-free fluorescence aptasensing strategy for highly sensitive detection of protein based on target-triggered hybridization chain reaction amplification[J]. Biosensors and Bioelectronics, 2015, 70: 324-329.Wang X, Lau C, Kai M, et al. Hybridization chain reaction-based instantaneous derivatization technology for chemiluminescence detection of specific DNA sequences[J]. Analyst, 2013, 138(9): 2691-2697.Wu H, Zhang K, Liu Y, et al. Binding-induced and label-free colorimetric method for protein detection based on autonomous assembly of hemin/G-quadruplex DNAzyme amplification strategy[J]. Biosensors and Bioelectronics, 2015, 64: 572-578.Wu Z, Liu G Q, Yang X L, et al. Electrostatic Nucleic Acid Nanoassembly Enables Hybridization Chain Reaction in Living Cells for Ultrasensitive mRNA Imaging[J]. Journal of the American Chemical Society, 2015, 137(21): 6829-6836.Xiao Y, Qu X, Plaxco K W, et al. Label-free electrochemical detection of DNA in blood serum via target-induced resolution of an electrode-bound DNA pseudoknot[J]. Journal of the American Chemical Society, 2007, 129(39): 11896-11897.Xu W, Xue X, Li T, et al. Ultrasensitive and selective colorimetric DNA detection by nicking endonuclease assisted nanoparticle amplification[J]. Angewandte Chemie International Edition, 2009, 48(37): 6849-6852.Xuan F, Hsing I M. Triggering hairpin-free chain-branching growth of fluorescent DNA dendrimers for nonlinear hybridization chain reaction[J]. Journal of the American Chemical Society, 2014, 136(28): 9810-9813.Yang L, Liu C, Ren W, et al. Graphene surface-anchored fluorescence sensor for sensitive detection of microRNA coupled with enzyme-free signal amplification of hybridization chain reaction[J]. ACS applied materials & interfaces, 2012, 4(12): 6450-6453.Yang X, Yu Y, Gao Z. A highly sensitive plasmonic DNA assay based on triangular silver nanoprism etching[J]. ACS nano, 2014, 8(5): 4902-4907.Zhao W, Ali M M, Brook M A, et al. Rolling circle amplification: applications in nanotechnology and biodetection with functional nucleic acids[J]. Angewandte Chemie International Edition, 2008, 47(34): 6330-6337.Zheng J, Hu Y, Bai J, et al. Universal surface-enhanced Raman scattering amplification detector for ultrasensitive detection of multiple target analytes[J]. Analytical chemistry, 2014, 86(4): 2205-2212.Zhu N, Zhang A, Wang Q, et al. Electrochemical detection of DNA hybridization using methylene blue and electro-deposited zirconia thin films on gold electrodes[J]. Analytica chimica acta, 2004, 510(2): 163-168.