Cloning and Expression Analysis of Sulfur Dioxygenase Gene VvETHE1 in Grapevine (Vitis vinifera)
YAN Jing1,2,*, SONG Jia-Ning1,2,*, WANG Ling1,2, WANG Yue-Jin1,2, ZHANG Chao-Hong1,2,**
1 State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China; 2 Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northwest Region), Ministry of Agriculture, Yangling 712100, China
Abstract:Sulfur dioxygenase 1 (ethylmalonic encephalopathy protein 1, ETHE1), the key enzyme in the oxidation of sulfides into sulfates, is mainly involved in plant stress tolerance, hormone response, seed development and survival. In this study, two VvETHE1s were cloned from Vitis vinifera. 'Pinot Noir' through reverse transcription PCR (RT-PCR), and named VvETHE1A (GenBank No. LOC100248855) and VvETHE1B (GenBank No. LOC100262655). The ORF of VvETHE1A was 867 bp, encoding 288 amino acids; while VvETHE1B was 861 bp encoding 286 amino acids. Multiple sequence alignment indicated that VvETHE1s were highly conserved in the domain of metallo-β-lactamase family. Evolutionary analysis showed that the genetic distance between VvETHE1A and jujube (Ziziphus jujuba) ETHE1 was closer than VvETHE1B. By semi-quantitative reverse transcription and PCR (sqRT-PCR), tissue-specific expression analysis showed both VvETHE1A and VvETHE1B were expressed in all tissues with different levels, among which VvETHE1B was highly expressed in root. qRT-PCR analysis showed that the expression levels of VvETHE1A and VvETHE1B were significantly different in the ovules of Vitis vinifera 'Pinot noir' and 'Thompson Seedless'. And both of them decreased in the ovules of 35~45 d after full-bloom of Thompson Seedless. VvETHE1A responded strongly to exogenous abscisic acid (ABA), followed by ethylene (ETH), while VvETHE1B strongly responded to methyljasmonate (MeJA), weakly to ABA and ETH. Moreover, the prokaryotic expression vectors of VvETHE1s were constructed and 2 fusions of about 35 kD were induced in the form of inclusion body. Decrease of induction temperature and increase of time resulted in high yield of recombinant VvETHE1s. The optimal induction condition was 28 ℃ for 6 h, and more soluble proteins were induced at 16 ℃. This study provide a basis for further studies on the regulatory mechanism of VvETHE1s in seed abortion and hormone response, and on the physiological and biochemical characteristics of VvETHE1s.
[1] 崔梦杰, 王晨, 张文颖, 等. 2017. 无核葡萄研究进展[J]. 植物生理学报, 53(3): 317-330. (Cui M J, Wang C, Zhang W Y, et al.2017. Research progress of seedless grape[J]. Plant Physiology Journal, 53(3): 317-330.) [2] 刘小宁, 王跃进, 张剑侠, 等. 2005. Flame Seedless葡萄胚珠、胚乳及胚发育与败育的研究[J]. 西北植物学报, (10): 1947-1953. (Liu X N, Wang Y J, Zhang J X, et al. 2005. Development and abortion of ovules, endosperms and embryo of flame seedless grape[J]. Acta Botanica Boreali-Occidentalia Sinica, (10): 1947-1953.) [3] 孙博, 曹后男, 何伟, 等. 2009. 假单性结实无核葡萄胚败育时期的研究[J]. 延边大学农学学报, 3(2): 159-164. (Sun B, Cao H N, He W, et al.2009. Study on embryo abortion stage of pseudoparthenocarpy seedless grape[J]. Journal of Agricultural Science Yanbian University, 3(2): 159-164.) [4] 王飞, 王跃进, 周会玲, 等. 2005. 无核葡萄与中国野生葡萄杂种胚发育和败育的细胞学研究[J]. 西北农林科技大学学报(自然科学版), 33(3): 61-66. (Wang F, Wang Y J, Zhou H L, et al.2005. Cytological study of embryo development and abortion in hybrid progeny of seedless grape and Chinese wild grapes[J]. Journal of Northwest Sci-Tech University of Agriculture and Forestry (Nature Science Edition), 33(3): 61-66.) [5] 王晏青, 张小莹, 宋珈凝, 等. 2016. 葡萄抗白粉病相关基因γVPE的克隆与表达分析[J]. 西北植物学报, 36(8): 1507-1514. (Wang Y Q, Zhang X Y, Song J N, et al.2016. Cloning and expression analysis of γVPE gene related to powdery mildrew resistance in grapevine[J]. Acta Botanica Boreali-Occidentalia Sinica, 36(8): 1507-1514.) [6] 吴潇, 陈杨杨, 石新杰, 等. 2018. 喷施外源激素对'玉露香'梨叶片表皮蜡质组分、结构及渗透性的影响[J]. 南京农业大学学报, 41(4): 647-654. (Wu X, Chen Y Y, Shi X J, et al.2018. Effects of spraying exogenous hormones on cuticular wax composition, structure and permeability of the leaves in 'Yuluxiang' pear[J]. Journal of Nanjing Agricultural University, 41(4): 647-654.) [7] 张利, 孟新法, 张潞生, 等. 1991. 无核葡萄胚发育及早期离体培养的研究: Ⅱ. 无核葡萄发育的特点[J]. 北京农业大学学报, 17(4): 55-59. (Zhang L, Meng X F, Zhang L S, et al.1991. A study on ovule development of seedless grapes and its early culture in vitro Ⅱ. The characteristics of embryo development of seedless grapes[J]. Acta Agriculturae Unviversitatis Pekinensis, 17(4): 55-59.) [8] Birke H, Haas F, De Kok L, et al.2012. Cysteine biosynthesis, in concert with a novel mechanism, contributes to sulfide detoxification in mitochondria of Arabidopsis thaliana[J]. The Biochemical Journal, 445(2): 275-283. [9] Bozidar K, Joze N.1995. The effect of jasmonic acid on flowering in Spirodela polyrrhiza (L.) Schleiden[J]. Journal of Plant Physiology, 146(5-6): 754-756. [10] Carneros E, Toribio M, Celestino C.2017. Effect of ABA, the auxin antagonist PCIB and partial desiccation on stone pine somatic embryo maturation[J]. Plant Cell Tissue and Organ Culture, 131(3): 445-458. [11] Di Meo I, Fagiolari G, Prelle A, et al.2011. Chronic exposure to sulfide causes accelerated degradation of cytochrome c oxidase in ethylmalonic encephalopathy[J]. Antioxid Redox Signal, 15(2): 353-362. [12] Georgious G, Valax P.1996. Expression of correctly folded proteins in E. coli[J]. Current Opinion Biotechnology, 7(2): 190-197. [13] Hildebrandt T M, Grieshaber M K.2008. Three enzymatic activities catalyze the oxidation of sulfide to thiosulfate in mammalian and invertebrate mitochondria[J]. Febs Journal, 275(13): 3352-3361. [14] Höfler S, Lorenz C, Busch T, et al.2016. Dealing with the sulfur part of cysteine: Four enzymatic steps degrade L-cysteine to pyruvate and thiosulfate in Arabidopsis mitochondria[J]. Physiologia Plantarum, 157(3): 352-366. [15] Holdorf M M, Bennett B, Crowder M W, et al.2008. Spectroscopic studies on Arabidopsis ETHE1, a glyoxalaseII-like protein[J]. Journal of Inorganic Biochemistry, 102(9): 1825-1830. [16] Holdorf M M, Owen H A, Lieber S R, et al.2012. Arabidopsis ETHE1 encodes a sulfur dioxygenase that is essential for embryo and endosperm development[J]. Plant Physiology, 160(1): 226-236. [17] Hu Y, Han Y T, Zhang K, et al.2016. Identification and expression analysis of heat shock transcription factors in the wild Chinese grapevine (Vitis pseudoreticulata)[J]. Plant Physiology and Biochemistry, 99(2): 1-10. [18] Jackson M R, Melideo S L, Jorns M S.2012. Human sulfide: Quinone oxidoreductase catalyzes the firststep in hydrogen sulfide metabolism and produces a sulfane sulfur metabolite[J]. Biochemistry, 51(34): 6804-6815. [19] Jaillon O, Aury J, Noel B, et al.2007. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla[J]. Nature, 449: 463-467. [20] Kaur C, Mustafiz, A, Sarkar A, et al.2014. Expression of abiotic stress inducible ETHE1-like protein from rice is higher in roots and is regulated by calcium[J]. Physiologia Plantarum, 152(1): 1-16. [21] Krüßel L, Junemann J, Wirtz M, et al.2014. The mitochondrial sulfur dioxygenase ETHYLMALONIC ENCEPHALOPATHY PROTEIN1 is required for amino acid catabolism duringcarbohydratesta-rvation and embryo development in Arabidopsis[J]. Plant Physiology, 165(1): 92-104. [22] Larkin M A, Blackshields G, Brown N, et al.2007. Clustal W and clustal X version 2.0[J]. Bioinformatics, 23(21): 2947-2948. [23] Li D M, Guo Y K, Li Q, et al.2012. The pretreatment of cucumber with methyl jasmonate regulates antioxidant enzyme activities and protects chloroplast and mitochondrial ultrastructure in chilling-stressed leaves[J]. Scientia Horticulturae, 143(11): 135-143. [24] Lorenz C, Brandt S, Borisjuk L, et al.2018. The role of persulfide metabolism during Arabidopsis seed development under light and dark conditions[J]. Frontiers in Plant Science, 9: 1381. [25] Malabarba J, Buffon V, Mariath J, et al.2017. The MADS-box gene Agamous-like 11 is essential for seed morphogenesis in grapevine[J]. Journal of Experimental Botany, 68(7): 1493-1506. [26] Tamura K, Peterson D, Peterson N, et al.2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods[J]. Molecular Biology and Evolution, 28(10): 2731-2739. [27] Tiranti V, Briem E, Lamantea E, et al.2006. ETHE1 mutations are specific to ethylmalonic encephalopathy[J]. Journal of Medical Genetics, 43(4): 340-346. [28] Tiranti V, D' Adamo P, Briem E, et al.2004. Ethylmalonic encephalopathy is caused by mutations in ETHE1, a gene encoding a mitochondrial matrix protein[J]. American Journal of Human Genetics, 74(2): 239-252. [29] Tiranti V, Viscomi C, Hildebrandt T, et al.2009. Loss of ETHE1, a mitochondrial dioxygenase, causes fatal sulfide toxicity in ethylmalonic encephalopathy[J]. Nature Medicine, 15(2): 200-205. [30] Xie Y, Wetlaufer D B.1996. Control of aggregation in protein refolding: The temperature-leap tactic[J]. Protein Science, 5(3): 517-523. [31] Yang N, Guo X R, Wu Y, et al.2018. The inhibited seed germination by ABA and MeJA is associated with the disturbance of reserve utilizations in Astragalus membranaceus[J]. Journal of Plant Interactions, 13(1): 388-397. [32] Yuan J S, Reed A, Feng C, et al.2006. Statistical analysis of real-time PCR data[J]. BMC Bioinformatics, 7(4): 563-569. [33] Zang T M, Hollman D A, Crawford P A, et al.2001. Arabidopsis glyoxalase II contains a zinc/iron binuclear metal center that is essential for substrate binding and catalysis[J]. The Journal of Biological Chemistry, 276(7): 4788-4795. [34] Zhang C H, Gong P J, Wei R, et al.2013. The metacaspase gene family of Vitis vinifera L.: Characterization and differential expression during ovule abortion in stenospermocarpic seedless grapes[J]. Gene, 528(2): 267-276.