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2025年8月6日 星期三
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小麦AB基因组中一个重复序列的分离、定位与应用
曾子贤 杨足君 刘成 胡利君 任正隆
电子科技大学生命科学与技术学院分子细胞遗传学实验室 电子科技大学生命科学与技术学院分子细胞遗传学实验室 电子科技大学生命科学与技术学院分子细胞遗传学实验室 电子科技大学生命科学与技术学院分子细胞遗传学实验室 电子科技大学生命科学与技术学院分子细胞遗传学实验室
Isolation, Mapping and Application of a Repetitive DNA Sequence in Wheat (Triticum aestivum) A, B genomes
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摘要 利用102对微卫星引物对5份黑麦(Secale)、4份普通小麦(Triticum aestivum)和1份分枝小黑麦(Triticale)进行SSR分析,引物Xgwm614能在分枝小黑麦中扩增出一个387bp的特异DNA片段(记为FZ387,GenBank登录号为EF179137),而黑麦未能扩增出。序列比对结果显示该片段与一粒小麦(T. monococcum)(AY485644)和栽培二粒小麦(T. turgidum)(AY494981)A基因组中Gypsy Ty3-LTR反转座子fatima的一部分分别有94%和95%同源性。根据序列同源性比对结果,在FZ387内部设计1对特异引物FaF和FaR。引物Xgwm614F和FaR能在含有A基因组的物种中扩增出约350bp的条带(记为A350),而其不含A基因组的物种都未扩增出该条带。利用小麦二体和端体代换系材料对其进行定位,结果显示该片段分布在所有A染色体的长臂和断臂上。此外,引物FaF和Xgwm614R能在含有A、B或AB基因组的物种中扩增出约350bp的条带(记为AB350),而不含AB基因组的材料未扩增出目标条带。利用这两对特异引物对小麦属近缘物种进行PCR扩增,发现只有中国春能够扩增出A350和AB350。序列比对结果和FZ387两侧SSR引物结合区的规律性变化表明该反转座子在进化上可能存在属间多样性和属内相似性。A350和AB350也可以分别作为分子标记检测A染色体和AB染色体。
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曾子贤杨足君刘成胡利君任正隆
关键词 小麦分子标记SSR反转座子    
Abstract:In this study, SSR analysis was performed on five Secale species, four Triticum species, and a Triticale with branch-like using 102 pairs of microsatellite primers. A 387bp specific DNA fragment FZ387 (Accession No. EF179137), was obtained from Triticale with branched-like by primer Xgwm614; however no amplification result revealed in Secale. The result of sequence comparison revealed this sequence had 94% and 95% similarity with a part of Gypsy Ty3-LTR-retrotransposon fatima in T. monoccocum (AY485644) and T. turgidum(AY494981), respectively. Based on the conservative region of this sequence, a pair of specific PCR primers, FaF and FaR, was designed. The result of amplification by Xgwm614F and FaR revealed that a specific DNA band of about 350 bp (designation as A350) was obtained from species containing A chromosomes; however, this segment was not appeared in materials not contain A chromosome. Chromosome map was performed on Landon Chinese Spring substitution lines and the result suggested that this segment was located on both long and short arms of all A chromosomes. Also the result of amplification by FaF and Xgwm614R appeared that a specific DNA band with about 350bp (designation as AB350) was obtained from materials containing A or/and B chromosomes; nevertheless this band was not revealed in materials not contain A and B genomes. Using the two pairs of primers, the result of amplification on relative species of Triticum revealed only A350 and AB350 in CS. The result of sequence comparison and variation of SSR primers binding regions of FZ387 indicated that significant diversity may existed in the internal sequence of this fatima element between genus and similarities within genus. Meanwhile, A350 and AB350 could be used as molecular markers for the detection of A and AB chromosomes.
Key wordsWheat    Molecular marker    SSR    Retrotransposon
收稿日期: 2008-03-27     
通讯作者: 曾子贤   
引用本文:   
曾子贤 杨足君 刘成 胡利君 任正隆. 小麦AB基因组中一个重复序列的分离、定位与应用[J]. , 2008, 16(6): 0-.
. Isolation, Mapping and Application of a Repetitive DNA Sequence in Wheat (Triticum aestivum) A, B genomes. , 2008, 16(6): 0-.
链接本文:  
http://journal05.magtech.org.cn/Jwk_ny/CN/      或     http://journal05.magtech.org.cn/Jwk_ny/CN/Y2008/V16/I6/0
 
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