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2025年8月21日 星期四
农业生物技术学报  2022, Vol. 30 Issue (5): 861-872    DOI: 10.3969/j.issn.1674-7968.2022.05.004
  研究论文与报告 本期目录 | 过刊浏览 | 高级检索 |
绿豆GRAS基因家族鉴定及其非生物胁迫下的表达模式分析
张文慧*, 何光鑫, 王子鑫, 周鹏, 徐红岩, 张琦, 杜吉到
黑龙江八一农垦大学 农学院,大庆 163319
Identification of GRAS Gene Family and Its Expression Pattern Analysis Under Abiotic Stress in Vigna radiata
ZHANG Wen-Hui*, HE Guang-Xin, WANG Zi-Xin, ZHOU Peng, XU Hong-Yan, ZHANG Qi, DU Ji-Dao
Agronomy College, Heilongjiang Bayi Agricultural University, Daqing 163319, China
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摘要 GRAS (gibberellic acid insensitive (GAI), repressor of GAI (RGA), and scarecrow (SCR))基因家族 广泛存在于植物中,对于植物响应逆境胁迫及生长、发育等方面起重要作用。绿豆(Vigna radiata)是我国 传统的经济作物,抗逆性强,是盐碱土壤改良的优良作物之一。本研究鉴定出 58 个绿豆 GRAS 基因,并 对这些基因进行生物信息学分析及非生物胁迫下的表达模式分析。结果表明,GRAS基因不均匀的分布在绿豆的 1~11 号染色体上 ;系统进化分析将 GRAS 基因分为 8 个亚家族(PAT1, DELLA, SCL3, LISCL, LS, SCR, SHR 和 HAM),同一亚家族的 VrGRAS 蛋白有相似的蛋白基序;基因结构分析发现绿豆 GRAS 内含子较少,在不同物种中具有较高的保守性;启动子区域含有脱落酸、乙烯、茉莉酸甲酯等激素响应元 件以及胁迫响应元件;qPCR 结果显示,绿豆 GRAS 基因在叶片中能够不同程度的响应盐、干旱、碱和低温 等非生物胁迫,且表达具有组织特异性。PAT1亚家族基因对绿豆响应逆境胁迫起重要的调控作用。本研究结果可为绿豆GRAS家族基因的抗逆功能分析提供参考。
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张文慧
何光鑫
王子鑫
周鹏
徐红岩
张琦
杜吉到
关键词 绿豆GRAS 基因家族非生物胁迫表达模式    
Abstract:GRAS (gibberellic acid insensitive (GAI), repressor of GAI (RGA), and scarecrow (SCR)) gene family widely exists in plants and plays important role in response to stress, plant growth and development. Vigna radiata is a traditional cash crop in China, with strong resistance to adversity, and it is one of the rominent crops to improved saline-alkali soil. In this study, 58 GRAS genes in Vigna radiata were identified and bioinformatics and expression analysis under abiotic stress were carried out. The results showed that GRAS genes were unevenly distributed on chromosomes 1~11 of Vigna radiata; By phylogenetic analysis, GRAS genes were divided into 8 subfamilies (PAT1, DELLA, SCL3, LISCL, LS, SCR, SHR and HAM), GRAS proteins of the same subfamily had similar protein motifs; Genetic structure analysis showed that almost all GRAS genes in Vigna radiata had no introns, and it was highly conserved in different species; The promoter region contained abscisic acid, ethylene, methyl jasmonate response elements and stress responseelements; qPCR results showed that GRAS genes in leaves could respond to abiotic stresses, such as salt, alkali, drought and low temperature stress in different degree and the expression of GRAS genes under stress was tissue specific. PAT1 subfamily gene played an important role in response to stress. The results would provide reference for analyse the functions of GRAS family genes in stress resistance in Vigna radiata.
Key wordsVigna radiata    GRAS gene family    Abiotic stress    Expression pattern
收稿日期: 2021-06-04     
ZTFLH:  S522  
基金资助:国家自然科学基金(31600532); 黑龙江八一农垦大学三横三纵支持计划(ZRCPY202001)
通讯作者: *hhsilence@163.com   
引用本文:   
张文慧, 何光鑫, 王子鑫, 周鹏, 徐红岩, 张琦, 杜吉到. 绿豆GRAS基因家族鉴定及其非生物胁迫下的表达模式分析[J]. 农业生物技术学报, 2022, 30(5): 861-872.
ZHANG Wen-Hui, HE Guang-Xin, WANG Zi-Xin, ZHOU Peng, XU Hong-Yan, ZHANG Qi, DU Ji-Dao. Identification of GRAS Gene Family and Its Expression Pattern Analysis Under Abiotic Stress in Vigna radiata. 农业生物技术学报, 2022, 30(5): 861-872.
链接本文:  
http://journal05.magtech.org.cn/Jwk_ny/CN/10.3969/j.issn.1674-7968.2022.05.004     或     http://journal05.magtech.org.cn/Jwk_ny/CN/Y2022/V30/I5/861
 
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