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2025年7月27日 星期日
农业生物技术学报  2019, Vol. 27 Issue (9): 1569-1581    DOI: 10.3969/j.issn.1674-7968.2019.09.006
  研究论文与报告 本期目录 | 过刊浏览 | 高级检索 |
CRISPR/Cas9介导的外源基因在猪PSP位点的定点整合
靳伟, 代敏敏, 李德娟, 樊宝良*
河北农业大学 动物科技学院,保定 071000
CRISPR/Cas9-mediated Site Specific Integration of Foreign Genes in Pig (Sus scrofa) PSP Locus
JIN Wei, DAI Min-Min, LI De-Juan, FAN Bao-Liang*
1 College of Animal Science and Technology, Hebei Agricultural University, Baoding 071001, China;
2 Hebei Animal Husbandry and Veterinary Institute, Baoding 071000, China;
3 College of Veterinary Medicine, Hebei Agricultural University, Baoding 071001, China;
4 College of Animal Science and Technology, China Agricultural University, Beijing 100193, China
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摘要 唾液腺生物反应器作为一种新型生物反应器,是利用唾液分泌蛋白的调控区特异性表达各种外源蛋白,常用的唾液分泌蛋白为腮腺分泌蛋白(parotid secretory protein, PSP)。本研究旨在建立利用CRISPR/Cas9系统对猪(Sus scrofa) PSP基因定点整合的方法体系,并分析CRISPR/Cas9对PSP基因整合的脱靶效应,筛选获得能够实现上述目标的有效的基于CRISPR/Cas9系统的sgRNA。实验首先根据PSP基因序列在线设计单链引导RNA (single guiding RNA, sgRNA),选出5条sgRNA序列;然后利用sgRNA体外转录试剂盒和Cas9体外酶切试剂盒,筛选出靶向PSP基因体外酶切活性较高的sgRNA序列,构建sgRNA和Cas9共表达载体pCas9-sgRNA,同时构建携带新霉素抗性基因(neomycin resistance gene, NeoR)表达结构的打靶载体pMD19-5'arm-NeoR-3'arm;最后将sgRNA和Cas9共表达载体和打靶载体共转染猪肾细胞(PK-15细胞),利用新霉素进行筛选,分离单细胞克隆。通过PCR及测序鉴定NeoR定点敲入阳性单克隆细胞并进行脱靶效应分析。体外酶切结果表明,sgRNA1、sgRNA3、sgRNA4和sgRNA5均有较高的体外酶切活性;测序结果显示,4个sgRNA均成功针对猪PSP基因实现了定点敲入,sgRNA1、sgRNA5敲入效率分别为22.7% (5/22)和26.1% (6/23),且均存在1个潜在脱靶位点发生了脱靶效应;sgRNA3、sgRNA4敲入效率分别为50.0% (12/24)和42.1% (8/19),5个潜在脱靶位点均未发生脱靶效应。本研究成功建立了针对猪PSP基因进行基因编辑的方法体系,筛选出高效引导外源基因定点敲入猪PSP基因的sgRNA,为深入研究转基因猪提供了基础资料。
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靳伟
代敏敏
李德娟
樊宝良
关键词 CRISPR/Cas9腮腺分泌蛋白基因(PSP)体外转录脱靶效应    
Abstract:As a novel bioreactor, the salivary gland bioreactor specifically expresses various foreign proteins by using the regulatory region of salivary secretory proteins. The commonly used salivary secretory protein is parotid secretory protein (PSP).The aim of this study is to establish a method for site-specific integration of foreign genes into PSP gene using the CRISPR/Cas9 system and analyze the off-target effect of the selected gRNA on PSP gene. Firstly, sgRNA sequences were designed online according to PSP gene sequence and 5 sgRNA sequences were selected. Then, using sgRNA in vitro transcription kit and Cas9 in vitro digestion kit, the sgRNA sequence with high in vitro activity which targeting PSP gene were screened out. At the same time the co-expression vectors of pCas9-sgRNA for sgRNA and Cas9 and a targeting vector pMD19-5'arm-NeoR-3'arm carrying the expression structure of neomycin resistance gene (NeoR) were constructed. Finally, sgRNA and Cas9 co-expression vector and target vector were co-transfected into porcine kidney cells (PK-15 cells), screened with neomycin, and single cell clones were isolated. Positive cell clones which was knocked-in neomycin resistance gene (NeoR) were identified by PCR and sequencing, the off-target effects of every sgRNA were analyzd. The results of in vitro enzyme digestion showed that sgRNA1, sgRNA3, sgRNA4 and sgRNA5 had higher activity in vitro. Sequencing results indicated that the 4 sgRNAs were successfully targeted the forigen gene into the PSP gene of Sus scrofa. The knock-in efficiency of sgRNA1 and sgRNA5 was 22.7% (5/22) and 26.1% (6/23), with 1 potential off-target site had off-target effect; The efficiency of sgRNA3 and sgRNA4 was 50.0% (12/24) and 42.1% (8/19), with no off-target effect at the 5 potential off-target sites. In this study, the method for gene editing of pig PSP gene was successfully established, and screening for sgRNAs that efficiently guide foreign genes into the pig PSP gene provides basic data for further research on transgenic Sus scrofa.
Key wordsCRISPR/Cas9    Parotid secretory protein gene (PSP)    In vitro transcription    Off-target effect
收稿日期: 2019-02-03     
ZTFLH:  S828.9  
基金资助:国家转基因生物新品种培育科技重大专项(No. 2014ZX08006-005)、国家自然科学基金(No. 30972081)、河北省科技支撑计划项目(No. 14236602D-4(2014))和河北省现代农业产业技术体系蛋肉鸡产业创新团队遗传资源开发与利用岗位项目(No. HBCT2018150201)
通讯作者: fanbl119@vip.sina.com   
引用本文:   
靳伟, 代敏敏, 李德娟, 樊宝良. CRISPR/Cas9介导的外源基因在猪PSP位点的定点整合[J]. 农业生物技术学报, 2019, 27(9): 1569-1581.
JIN Wei, DAI Min-Min, LI De-Juan, FAN Bao-Liang. CRISPR/Cas9-mediated Site Specific Integration of Foreign Genes in Pig (Sus scrofa) PSP Locus. 农业生物技术学报, 2019, 27(9): 1569-1581.
链接本文:  
http://journal05.magtech.org.cn/Jwk_ny/CN/10.3969/j.issn.1674-7968.2019.09.006     或     http://journal05.magtech.org.cn/Jwk_ny/CN/Y2019/V27/I9/1569
 
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