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Identification of Two Major Quantitative Trait Loci Restoring the Fertility of Cytoplasmic Male Sterility in Capsicum annuum |
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Abstract The fertility of cytoplasmic male sterility (CMS) can be restored by nuclear-encoded fertility restorer genes. However, the number and modifications of these restorer nucleor genes remain poorly understood. In this study, using QTL IciMapping software an intraspecific genetic linkage map of Capsicum annuum was constructed, and 2 major and 7 minor quantitative trait loci (QTLs) were identified, which acting as restorer-of-fertility (Rf) genes counteracting CMS. The heritability of the 2 major loci reached 92.58%. The first most important allele, qIF-3-1, contributed to fertility with a phenotypic variance explained (PVE) of 46.68%, with dominant and additive effects of 1.28 and 0.84, respectively. The other major allele contributing to fertility, qIF-5-1, was associated with a PVE of 47.10% and improved fertility with higher dominant effects of 1.76. Among 7 minor QTLs, 3 QTLs mainly acted as additive effect, while another 4 as dominant effect. These results are beneficial for our understanding of the mechanisms regulating the function of Rf genes. Moreover, our results provide guidance for selecting molecular markers in the development of marker-assisted selection (MAS) fertility restoration breeding schemes in peppers.
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Received: 08 June 2016
Published: 24 December 2016
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[1]Bentolila S A, Alfonso A, Hanson M R.2002. A pentatricopeptide repeat containing gene restores fertility to cytoplasmic malesterile plants[J]. Proceedings of the National Academy of Sciences of the United States of America, 99, 10887-10892.
[2]Brown G G, Formanova N, Jin H, et al.2003. The radish Rfo restorer gene of Ogura cytoplasmic male sterility encodes a protein with multiple pentatricopeptide repeats[J]. Plant Journal, 35, 262-272.
[3]Bosland P W, Votava E J.2000. Peppers: vegetable and spice capsicums. [M], Wallingford, CABI Publishing.
[4]Chase C D.2007. Cytoplasmic male sterility: a window to the world of plant mitochondrial-nuclear interactions [J]. Trends in Genetics, 23, 81-90.
[5]Cui X, Wise R P, Schnable P S.1996. The rf2 nuclear restorer gene of male-sterile T-cytoplasm maize[J]. Science, 272, 1334-1336.
[6]Desloire S, Gherbi H, Laloui W, et al.2003. Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide-repeat protein family[J]. EMBO Reports, 4, 588-594.
[7]Gulyas G, Pakozdi K, Lee J S, et al.2006. Analysis of fertility restoration by using cytoplasmic male-sterile red pepper (Capsicum annuum L.) lines [J]. Breeding Science, 56, 31-334.
[8]Hanson M R, Bentolila S.2004. Interactions of mitochondrial and nuclear genes that affect male gametophyte development [J]. Plant Cell, 16(Suppl), S154-S169.
[9]Janska H, Sarria R, Woloszynska M, et al.1998. Stoichiometric shifts in the common bean mitochondrial genome leading to male sterility and spontaneous reversion to fertility [J]. Plant Cell, 10, 1163-1180.
[10]Kim D H, Kang J G, Kim B D.2007. Isolation and characterization of the cytoplasmic male sterility-associated orf456 gene of chili pepper (Capsicum annuum L.) [J]. Plant Molecular Biology, 63, 519-532.
[11]Kim D H, Kim B D.2005. Development of SCAR markers for early identification of cytoplasmic male sterility genotype in chili pepper (Capsicum annuum L.) [J]. Molecules and Cells, 20, 416-422.
[12]Kim D H, Kim B D.2006. The organization of mitochondrial atp6 gene region in male fertile and CMS lines of pepper (Capsicum annuum L.) [J]. Current Genetics, 49, 59-67.
[13]Koizuka N, Imai R, Fujimoto H, et al.2003. Genetic characterization of a pentatricopeptide repeat protein gene, orf687, that restores fertility in the cytoplasmic male-sterile Kosena radish [J]. Plant Journal, 34, 407-415.
[14]Korzeniewska A.2005. Pepper production in the field[M]. Hortpress, Warsaw (in Polish).
[15]Komori T, Ohta S, Murai N, et al.2004. Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.) [J]. Plant Journal, 37, 315-325.
[16]Kosambi D D.1943. The estimation of map distances from recombination values[J]. Ann. Hum. Genetics, 12, 172-175.
[17]Kumar R, Kumar S, Dwivedi N, et al.2008. Validation of SCAR markers, diversity analysis of male sterile (S-) cytoplasms and isolation of an alloplasmic S-cytoplasm in Capsicum[J]. Scientia Horticulturae, 120, 167-172.
[18]Li G, Quiros C F.2001. Sequence-related amplified polymorphism (SRAP), a new marker system based on a simple PCR reaction: its application to mapping and gene tagging in Brassica[J]. Theoretical and Applied Genetics, 103, 455-461.
[19]Li H, Hearne S, B?nziger M, et al.2010. Statistical properties of QTL linkage mapping in biparental genetic populations[J]. Heredity, 105, 257-267.
[20]Li H, Ribaut J M, Li Z L, et al.2008. Inclusive composite interval mapping (ICIM) for digenic epistasis of quantitative traits in biparental populations[J]. Theoretical and Applied Genetics, 116, 243-260.
[21]Li H, Ye G, Wang J.2007. A modified algorithm for the improvement of composite interval mapping[J]. Genetics, 175, 361-374.
[22]Min W K, Kim S, Sung S K, et al.2009. Allelic discrimination of the Restorer-of-fertility gene and its inheritance in peppers (Capsicum annuum L.) [J]. Theoretical and Applied Genetics, 119, 1289-1299.
[23]Min W K, Lim H R, Lee Y P, et al.2008. Identification of a third haplotype of the sequence linked to the Restorer-of-fertility (Rf) gene and its implications for male-sterility phenotypes in peppers (Capsicum annuum L.) [J]. Molecules and Cells, 25, 20-29.
[24]Minamiyama Y, Tsuro M, Hirai M.2006. An SSR-based linkage map of Capsicum annuum[J]. Molecular Breeding, 18, 157-169.
[25]Novak F, Betlach J, Dubovsky J.1971. Cytoplasmic male-sterility in sweet pepper (Capsicum annuum L.). I. Phenotype and inheritance of male sterile character[J]. Z. Pflanzenzücht, 65, 129-140.
[26]Peterson P A.1958. Cytoplasmically inherited male sterile in Capsicum[J]. American Naturalist, 92, 111-119.
[27]Shifriss C.1997. Male sterility in pepper (Capsicum annuum L.) [J]. Euphytica, 93, 83-88.
[28]Sugita T, Semi Y, Sawada H, et al.2013. Development of simple sequence repeat markers and construction of a high-density linkage map of Capsicum annuum L.[J]. Molecular Breeding. 31, 909-920.
[29]Wang L H, Zhang B X, Lefebvre V, et al.2004. QTL analysis of fertility restoration in cytoplasmic male sterile pepper[J]. Theoretical and Applied Genetics, 109, 1058-1063.
[30]Wei B Q, Wang L L, Chen L Z, et al.2013. Genetic analysis on the restoration of cytoplasmic male sterility with mixed model of major gene plus polygene in pepper[J]. Acta Horticulturae Sinica, 41, 2263-2268. (in Chinese)
[31]Wu F N, Eannetta N T, Xu Y M, et al.2009. A COSII genetic map of the pepper genome provides a detailed picture of synteny with tomato and new insights into recent chromosome evolution in the genus Capsicum[J]. Theoretical and Applied Genetics, 118, 1279-1293.
[32]Zhang B X, Huang S W, Yang G M, et al.2000. Two RAPD markers linked to a major fertility restorer gene in pepper[J]. Euphytica, 113, 155-161.
[33]Zhang Z F, Shi H C, Wu J, et al.2005. Advanced technique for silver staining of polyacrylamide gel of microsatellite DNA[J]. Biotechnology, 15, 51-53. (in Chinese)
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