|
|
Molecular Feature, Action Mechanism and Biology Function of Circular RNA |
1, 1, 1, 1 |
|
|
Abstract Circular RNA (circRNA) is a group of non-coding RNA (ncRNA) characterized by the presence of a covalent bond linking 3' and 5' ends produced by backsplicing. It widely spreads and has the features of construct stability, sequence conservative, cell or tissue-specific expression and so on. So far, circRNA has been found exist in different species extensively and already three classes of circRNA have been detected, including exonic circRNA, circular intronic RNA (ciRNA) and exon-intron RNA (ElciRNA). Concerning the biogenesis of these circRNAs, scientists purposed six models in total, among them, three models clarified the formation of exonic circRNA and ElciRNA, and the others explained the generation of ciRNA. As research continues, there were lots of experiments support these models directly or indirectly. Moreover, some papers reported that the biogenesis of circRNA was regulated by splicing factors, such as SR, hnRNP and RBM20 etc. Relative researches showed that circRNA performs its function through various channels. Part of circRNAs act as natural microRNA (miRNA) spong to regulate the expression of them, and ciRNA or ElciRNA interacts with snRNP and recruits RNA Polymerase Ⅱ in the promoter region of the host-gene around where they are derived to regulate gene expression in cis. Besides, some circRNAs could regulate cell cycle or ageing etc. by interacting with protein. Although there was no evidence to show that circRNA can be translated in eukaryotes, some groups have found a number of virus circRNAs and viroid circRNAs could be translated into protein. Notably, circRNA is closely related to the diseases such as cancer (including breast cancer, lung cancer, hepatocellular carcinoma etc.) and cardiopathy, which are known as human healthy killer, it also plays a role in neurodevelopment, immune and other physiological process, indicating its significant value. This paper summarized the formation mechanism and features of circRNA, as well as the recent advance of circRNA in mainly function, relative research methods and the relationship with disease, at the last part of this paper, we discussed the unresolved issues about circRNA, such as which type of spliceosomes participate in back-splicing and how do them assembly and work? How the nucleocytoplasmic export of circRNA is regulated? as well as how circRNA is ultimately degraded. In general, circRNA extend the diversity and complexity of eukaryotic transcriptomes, and we believe that delve into circRNA will enrich the study content of the post-genome era and provide theoretical basis and technical guidance for better understanding, diagnosing and treatment of human diseases
|
Received: 29 August 2016
Published: 02 March 2017
|
|
Fund:;Yak and beef cattle industry technology system of China;National Project of Scientific Innovation Experiment for undergraduate of Northwest A&F University;Technology Foundation for Selected Overseas Chinese Scholar of Shaanxi Province |
|
|
|
[1]付丽云, 胡耀仁, 郭俊明.环状RNA 与人类疾病[J] (Fu L Y, Hu Y R, Guo J M. 2015. CircRNAs and human diseases[J]. Chinese Journal of Biochemistry Molecular Biology, 31(8):771-778.)[J].中国生物化学与分子生物学报, 2015., 31((8)):771-778
[2]李培飞, 陈声灿, 邵永富, 等.2014. 环状RNA 的生物学功能及其在疾病发生中的作用[J]. 生物物理学
[3]报, 30(1):15-23.(Li P F, Chen S C, Shao Y F, et al. 2014. Biological Functions of circular RNAs and their roles in occurrence of diseases[J]. Acta Biochimica et Biophysica Sinica, 30(1):15-23)
[4]夏 天, 蒋孝明, 陈晓敏, 等.2013. 环状RNA: 竞争性内源RNA新成员[J]. 中国细胞生物学学
[5]报, 35(11):1695-1700.(Xia T, Jiang X M, Chen X M, et al. 2013. Circular RNA: A New Member of Competing Endogenous RNAs[J]. Chinese Journal of Cell Biology, 35(11):1695-1700.)
[6]赵 明, 谢 浩, 胡志迪, 等.2016. 环状RNA: 新型生物标记物与治疗靶点[J]. 生物化学与生物物理进展,
[7](7): 635-643.(Zhao M, Xie H, Hu Z D, et al. 2016. Circular RNA: New Type of Biomarkers and Therapeutic Targets[J]. Progress in Biochemistry and Biophysics, 43(7):635-643.)
[8]Abe N, Hiroshima M, Maruyama H, et al.2013. Rolling circle amplification in a prokaryotic translation system using small circular RNA[J]. Angewandte Chemie-International Edition, 52(27):7004-7008.
[9]Abe N, Matsumoto K, Nishihara M, et al.2015. Rolling circle translation of circular RNA in living human cells[J].Scientific Reports, 5:16435.
[10]Abouhaidar M G, Venkataraman S, Golshani A, et al.2014. Novel coding translation and gene expression of a replicating covalently closed circular RNA of 220 nt[J]. Proceedings of the National Academy of Sciences of the United States of America, 111(40):14542-14547.
[11]Alhasan A A, Izuogu O G, AlL-Balool H H, et al.2016. Circular RNA enrichment in platelets is a signature of transcriptome degradation[J]. Blood, 127(9):e1-e11.
[12]Arnberg A C, Van Ommen G J, Grivell L A, et al.1980. Some yeast mitochondrial RNAs are circular[J]. Cell, 19(2): 313-319.
[13]Ashwal-Fluss R, Meyer M, Pamudurti N R, et al.2014. circRNA biogenesis competes with pre-mRNA splicing[J]. Molecular Cell, 56(1):55-66.
[14]Bachmayr-Heyda A, Reiner A T, Auer K, et al.2015. Correlation of circular RNA abundance with proliferation--exemplified with colorectal and ovarian cancer, idiopathic lung fibrosis, and normal human tissues[J]. Scientific Reports, 5:8057.
[15]Bahn J H, Zhang Q, Li F, et al.2015. The landscape of microRNA, piwi-interacting RNA, and circular RNA in human saliva[J]. Clinical Chemistry, 61(1):221-230.
[16]Bao C, Lyu D, Huang S, et al.2016. Circular RNA expands its territory[J].Molecular & Cellular Oncology, 3(2):e1084443.Boeckel J N, Jaé N, Heumuller A W, et al. 2015. Identification and Characterization of Hypoxia-Regulated Endothelial Circular RNA[J]. Circulation Research, 117(10):884-890.
[17]Bohjanen P R, Colvin R A, Puttaraju M, et al.1996. A small circular TAR RNA decoy specifically inhibits Tat-activated HIV-1 transcription[J]. Nucleic Acids Research, 24 (19):3733-3738.
[18]Burd C E, Jeck W R, Liu Y, et al.2010. Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk[J]. PLoS Genetics, 6(12):e1001233.
[19]Capel B, Swain A, Nicolis S, et al.1993. Circular transcripts of the testis-determining gene Sry in adult mouse testis[J]. Cell, 73(5):1019-1030.
[20]Cheng A M, Byrom M W, Shelton J, et al.2005. Antisense inhibition of human miRNAs and indications for an involvement of miRNA in cell growth and apoptosis [J]. Nucleic Acids Research, 33(4):1290-1297.
[21]Chou Y T, Lin H H, Lien Y C, et al.2010. EGFR promotes lung tumorigenesis by activating miR-7 through a Ras /ERK/Myc pathway that targets the Ets2 transcriptional repressor ERF[J]. Cancer Research, 70(21): 8822-8831.
[22]Chuang T J, Wu C S, Chen C Y, et al.2016. NCLscan: accurate identification of non-co-linear transcripts (fusion, trans-splicing and circular RNA) with a good balance between sensitivity and precision[J]. Nucleic Acids Research, 44(3):e29.
[23]Cocquerelle C, Daubersies P, Majerus M A, et al.1992. Splicing with inverted order of exons occurs proximal to large introns[J]. The Embo Journal, 11(3):1095-1098.
[24]Conn S J, Pillman K A, Toubia J, et al.2015. The RNA binding protein quaking regulates formation of circRNAs[J]. Cell, 160 (6):1125-1134.
[25]Danan M, Schwartz S, Edelheit S, et al.2012. Transcriptome-wide discovery of circular RNAs in Archaea[J]. Nucleic Acids Research, 40(7):3131-3142.
[26]Dou C, Cao Z, Yang B, et al.2016. Changing expression profiles of lncRNAs, mRNAs, circRNAs and miRNAs during osteoclastogenesis [J].Scientific Reports, 6:21499.
[27]Du W W, Yang W, Chen Y, et al.2016a. Foxo3 circular RNA promotes cardiac senescence by modulating multiple factors associated with stress and senescence responses[J]. European Heart Journal, pii: ehw001.
[28]Du W W, Yang W, Liu E, et al.2016b. Foxo3 circular RNA retards cell cycle progression via forming ternary complexes with p21 and CDK2[J]. Nucleic Acids Research, 44(6):2846-2858.
[29]Dudekula D B, Panda A C, Grammatikakis I, et al.2016. CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs[J]. RNA Biology, 13(1):34-42.
[30]Ebbesen K K, Kjems J, Hansen T B.2016[J].Circular RNAs: Identification, biogenesis and function[J]. Biochimica et Biophysica Acta, 1859, (1):163-168
[31]Fan X, Zhang X, Wu X, et al.2015. Single-cell RNA-seq transcriptome analysis of linear and circular RNAs in mouse preimplantation embryos[J]. Genome Biology, 16:148.
[32]Fang Y, Xue J L, Shen Q, et al.2012. MicroRNA-7 inhibits tumor growth and metastasis by targeting the PI3K/AKT pathway in hepatocellular carcinoma[J]. Hepatology, 55(6): 1852-1862.
[33]Filippenkov I B, SudarkinaO Y, Limborska S A, et al.2015. Circular RNA of the human sphingomyelin synthase 1 gene: Multiple splice variants, evolutionary conservatism and expression in different tissues[J]. RNA Biology, 12(9):1030-1042.
[34]Geng H H, Li R, Su Y M, et al.2016. The circular RNA Cdr1as promotes myocardial infarction by mediating the regulation of miR-7a on its target genes expression[J]. PLoS One, 11(3):e0151753.
[35]Ghosal S, Das S, Sen R, et al.2013. Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits[J]. Frontiers in Genetics, 4:283.
[36]Glazar P, Papavasileiou P, Rajewsky N.2014. circBase: a database for circular RNAs[J]. RNA, 20(11):1666-1670.
[37]Guarnerio J, Bezzi M, Jeong J C, et al.2016. Oncogenic role of fusion-circRNAs derived from cancer-associated chromosomal translocations[J]. Cell, 166(4):1055-1056.
[38]Guo J U, Agarwal V, Guo H, et al.2014. Expanded identification and characterization of mammalian circular RNAs[J]. Genome Biology, 15(7):409.
[39]Hansen T B, Jensen T I, Clausen B H, et al.2013a. Natural RNA circles function as efficient microRNA sponges[J]. Nature, 495(7441):384-388.
[40]Hansen T B, Kjems J, Damgaard C K.2013b. Circular RNA and miR-7 in cancer[J]. Cancer Research, 73(18):5609-5612.
[41]Hansen T B, Ven? M T, Damgaard C K, et al.2016. Comparison of circular RNA prediction tools[J]. Nucleic Acids Research, 44(6):e58.
[42]Hansen T B, Wiklund E D, Bramsen J B, et al.2011. miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA[J].The Embo Journal, 30(21):4414-4422.
[43]Hoffmann S, Otto C, Doose G, et al.2014. A multi-split mapping algorithm for circular RNA, splicing, trans-splicing, and fusion detection[J]. Genome Biology, 15(2):R34.
[44]Hsu M T, Coca-Prados M.1979. Electron microscopic evidence for the circular form of RNA in the cytoplasm of eukaryotic cells[J]. Nature, 280(5720):339-340.
[45]Huntzinger E, Izaurralde E.2011. Gene silencing by microRNAs: contributions of translational repression and mRNA decay [J].Nature Reviews Genetics, 12(2): 99-110.
[46]Ivanov A, Memczak S, Wyler E, et al.2015. Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals[J]. Cell Reports, 10 (2):170-177.
[47]Jakobi T, Czaja-Hasse L F, Reinhardt R, et al.2016. Profiling and Validation of the Circular RNA Repertoire in Adult Murine Hearts[J]. Genomics Proteomics &Bioinformatics, 14(4):216-223.
[48]Jeck W R, Sorrentino J A, Wang K, et al.2013. Circular RNAs are abundant, conserved, and associated with ALU repeats[J]. RNA, 19(2):141-157.
[49]Jiang L, Liu X, Chen Z, et al.2010. MicroRNA-7 targets IGF1R( insulin-like growth factor 1 receptor) in tongue squamous cell carcinoma cells[J]. The Biochemical journal, 432(1): 199-205.
[50]Kefas B, Godlewski J, Comeau L, et al.2008. microRNA-7 inhibits the epidermal growth factor receptor and the akt pathway and is down-regulated in glioblastoma[J]. Cancer Research, 68(10): 3566-3572.
[51]Khan M A, Reckman Y J, Aufiero S, et al., 2016. RBM20 Regulates Circular RNA Production From the Titin Gene[J].Circulation Research, pii: CIRCRESAHA.116.309568.
[52]Kolakofsky D.1976. Isolation and characterization of Sendai virus DI-RNAs[J]. Cell, 8(4):547-555.
[53]Kong X, Li G, Yuan Y, et al.2012. MicroRNA-7 inhibits epithelialto-mesenchymal transition and metastasis of breast cancer cells via targeting FAK expression[J]. PLoS One, 7(8): e41523.
[54]Kos A, Dijkema R, Arnberg A C, et al.1986. The hepatitis d (delta) virus possesses a circular RNA[J]. Nature, 323(6088):558-560.
[55]Kramer M C, Liang D, Tatomer D C, et al.2015. Combinatorial control of Drosophila circular RNA expression by intronic repeats, hnRNPs, and SR proteins[J]. Genes & Development, 29(20):2168-2182.
[56]Li F, Zhang L, Li W, et al.2015a. Circular RNA ITCH has inhibitory effect on ESCC by suppressing the Wnt/β-catenin pathway[J]. Oncotarget, 6(8):6001-6013.
[57]Li J H, Liu S, Zhou H, et al.2014. starBasev2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data[J]. Nucleic Acids Research, 42 (Database issue): D92-97.
[58]Li P, Chen S, Chen H, et al.2015c. Using circular RNA as a novel type of biomarker in the screening of gastric cancer[J]. Clinica Chimica Acta, 444:132-136
[59]Li Z, Huang C, Bao C, et al.2015b. Exon-intron circular RNAs regulate transcription in the nucleus[J]. nature structural & molecular biology, 22(3):256-264.
[60]Liu Q, Zhang X, Hu X, et al.2016a. Circular RNA related to the chondrocyte ECM regulates MMP13 expression by functioning as a MiR-136 'Sponge' in human cartilage degradation[J]. Scientific Reports, 6:22572.
[61]Liu Y C, Li J R, Sun C H, et al.2016b. CircNet: a database of circular RNAs derived from transcriptome sequencing data[J]. Nucleic Acids Research, 44(D1):D209-215.
[62]Lukiw W J.2013. Circular RNA (circRNA) in Alzheimer's disease (AD) [J].Frontiers in Genetics, 4: 307.
[63]Matsumoto Y, Fishel R, Wickner R B.1990. Circular single-stranded RNA replicon in Saccharomyces cerevisiae[J]. Proceedings of the National Academy of Sciences of the United States of America, 87(19):7628-7632.
[64]Mattick J S, Makunin I V.2006. Non-coding RNA[J]. Human Molecular Genetics, 15 Spec No 1: R17-29.
[65]Memczak S, Jens M, Elefsinioti A, et al.2013. Circular RNAs are a large class of animal RNAs with regulatory potency[J]. Nature, 495(7441):333-338.
[66]Memczak S, Papavasileiou P, Peters O, et al.2015. Identification and characterization of circular RNAs as a new class of putative biomarkers in human blood[J]. PLoS One, 10(10): e0141214
[67]Ng W L, Marinov G K, Liau E S, et al.2016. Inducible RasGEF1B circular RNA is a positive regulator of ICAM-1 in the TLR4/LPS pathway[J]. RNA Biology, 30:1-11.
[68]Nigro J M, Cho K R, Fearon E R, et al.1991. Scrambled exons[J]. Cell, 64(3):607-613.
[69]Nitsche A, Doose G, Tafer H, et al.2014. Atypical RNAs in the coelacanth transcriptome[J]. Journal of Experimental Zoology Part B-Molecular and Developmental Evolution, 322(6):342-351.
[70]Okuda H, Xing F, Pandey P R, et al.2013. miR-7 suppresses brain metastasis of breast cancer stem-like cells by modulating KLF4[J]. Cancer Research, 73(4): 1434-1444.
[71]Pan X, Xiong K.2015. PredcircRNA: computational classification of circular RNA from other long non-coding RNA using hybrid features[J]. Molecular Biosystems, 11(8):2219-2226.
[72]Qin M, Liu G, Huo X, et al.2016. Hsa_circ_0001649: A circular RNA and potential novel biomarker for hepatocellular carcinoma[J]. Cancer Biomarkers, 16(1):161-169.
[73]Qu S, Song W, Yang X, et al.2015. Microarray expression profile of circular RNAs in human pancreatic ductal adenocarcinoma[J]. Genomics Data, 5: 385-387.
[74]Reddy S D, Ohshiro K, Rayala SK, et al.2008. MicroRNA-7, a homeobox D10 target, inhibits p21-activated kinase 1 and regulates its functions[J]. Cancer Research, 68(20): 8195-8200.
[75]Rybak-Wolf A, Stottmeister C, Glazar P, et al.2015. Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed[J]. Molecular Cell, 58(5):870-885.
[76]Salmena L, Poliseno L, Tay Y, et al.2011. A ceRNA hypothesis: the rosetta stone of a hidden RNA language[J]. Cell, 146(3):353-358.
[77]Salzman J, Chen R E, Olsen M N, et al.2013. Cell-type specific features of circular RNA expression[J]. PLoS Genetics, 9(9):e1003777.
[78]Salzman J, Gawad C, Wang P L, et al.2012. Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types[J]. PLoS One, 7(2):e30733.
[79]Sand M, Bechara F G, Gambichler T, et al.2016a. Circular RNA expression in cutaneous squamous cell carcinoma[J]. Journal of Dermatological Science, 83(3):210-218.
[80]Sand M, Bechara F G, Sand D, et al.2016b. Circular RNA expression in basal cell carcinoma[J]. Epigenomics, 8(5):619-632.
[81]Sanger H L, Klotz G, Riesner D, et al.1976. Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures[J]. Proceedings of the National Academy of Sciences of the United States of America, 73(11):3852-3856.
[82]Saydam O, Senol O, Wurdinger T, et al.2011. miRNA-7 attenuation in schwannoma tumors stimulates growth by upregulating three oncogenic signaling pathways [J]. Cancer research, 71(3):852-861.
[83]Shang X, Li G, Liu H, et al.2016. Comprehensive circular RNA profiling reveals that hsa_circ_0005075, a new circular RNA biomarker, is involved in hepatocellular crcinoma development[J]. Medicine (Baltimore), 95(22):e3811.
[84]Song X, Zhang N, Han P, et al.2016. Circular RNA profile in gliomas revealed by identification tool UROBORUS[J]. Nucleic Acids Research, 44(9):e87.
[85]Su H, Lin F, Deng X, et al.2016. Profiling and bioinformatics analyses reveal differential circular RNA expression in radioresistant esophageal cancer cells[J]. Journal of Translational Medicine, 14(1):225.
[86]Szabo L, Morey R, Palpant N J, et al.2015. Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development[J]. Genome Biology, 16:126.
[87]Taylor JM.2006. Hepatitis delta virus [J]. Virology, 344(1):71-76.
[88]Ven? M T, Hansen T B, Ven? S T, et al.2015. Spatio-temporal regulation of circular RNA expression during porcine embryonic brain development[J]. Genome Biology, 16:245.
[89]Wang K, Long B, Liu F, et al.2016. A circular RNA protects the heart from pathological hypertrophy and heart failure by targeting miR-223[J]. European Heart Journal, pii: ehv713.
[90]Wang K, Singh D, Zeng Z, et al.2010. MapSplice:accurate mapping of RNA-seq reads for splice junction discovery[J]. Nucleic Acids Research, 38(18):e178.
[91]Wang P L, Bao Y, Yee M C, et al.2014. Circular RNA is expressed across the eukaryotic tree of life[J]. PloS One, 9(6):e90859.
[92]Wang Y, Liu J, Liu C, et al.2013. MicroRNA-7 regulates the mTOR pathway and proliferation in adult pancreatic beta-cells [J].Diabetes, 62(3): 887-895.
[93]Wang Y, Wang Z.2015. Efficient backsplicing produces translatable circular mRNAs[J].RNA, 21(2):172-179.
[94]Wang Y H, Yu X H, Luo S S, et al.2015. Comprehensive circular RNA profiling reveals that circular RNA100783 is involved in chronic CD28-associated CD8(+)T cell ageing[J]. Immunity & Ageing, 12:17.
[95]Webster R J, Giles K M, Price K J, et al.2009. Regulation of epidermal growth factor receptor signaling in human cancer cells by microRNA-7 [J]. Journal of Biological Chemistr, 284(9):5731-5741.
[96]Wu D G, Wang Y Y, Fan L G, et al.2011. MicroRNA-7 regulates glioblastoma cell invasion via targeting focal adhesion kinase expression [J]. Chinese Medical Journal, 124(17): 2616-2621.
[97]Wu Q, Wang Y, Cao M, et al.2012. Homology-independent discovery of replicating pathogenic circular RNAs by deep sequencing and a new computational algorithm[J]. Proceedings of the National Academy of Sciences of the United States of America, 109(10):3938-3943.
[98]Xiong S, Zheng Y, Jiang P, et al.2011. MicroRNA-7 inhibits the growth of human non-small cell lung cancer A549 cells through targeting BCL-2[J]. International Journal of Biological Sciences, 7(6): 805-814.
[99]Xuan L, Qu L, Zhou H, et al.2016. Circular RNA: a novel biomarker for progressive laryngeal cancer[J]. American Journal of Translational Research, 8(2):932-939.
[100]Yang W, Du W W, Li X, et al.2016. Foxo3 activity promoted by non-coding effects of circular RNA and Foxo3 pseudogene in the inhibition of tumor growth and angiogenesis[J]. Oncogene, 35(30):3919-3931.
[101]Yu L, Gong X, Sun L, et al.2016. The circular RNA Cdr1as act as an oncogene in hepatocellular carcinoma through targeting miR-7 expression[J].PLoS One, 11(7):e0158347.
[102]Yu Z, Ni L, Chen D, et al.2013. Identification of miR-7 as an oncogene in renal cell carcinoma[J]. Journal of Molecular Histology, 44(6): 669-677.
[103]Zaphiropoulos P G.1996. Circular RNAs from transcripts of the rat cytochrome P450 2C24 gene: correlation with exon skipping[J]. Proceedings of the National Academy of Sciences of the United States of America, 93(13):6536-6541.
[104]Zhang C, Wu H, Wang Y, et al.2016a. Circular RNA of cattle casein genes are highly expressed in bovine mammary gland[J]. Journal of Dairy Science, 99(6):4750-4760.
[105]Zhang C, Wu H, Wang Y, et al.2015. Expression patterns of circular RNAs from primary kinase transcripts in the mammary glands of lactating rats[J]. Journal of Breast Cancer, 18(3): 235-241.
[106]Zhang X, Hu S, Zhang X, et al.2014b. MicroRNA-7 arrests cell cycle in G1 phase by directly targeting CCNE1 in human hepatocellular carcinoma cells[J]. Biochemical and Biophysical Research Communications, 443(3):1078-1084.
[107]Zhang X O, Wang H B, Zhang Y, et al.2014a. Complementary sequence-mediated exon circularization[J]. Cell, 159(1):134-147.
[108]Zhang Y G, Yang H L, Long Y, et al.2016b. Circular RNA in blood corpuscles combined with plasma protein factor for early prediction of pre-eclampsia[J]. an International Journal of Obstetrics and Gynaecology, (doi: 10.1111/1471-0528.).
[109]Zhang Y, Zhang X O, Chen T, et al.2013. Circular intronic long noncoding RNAs[J].Molecular Cell, 51(6):792-806.
[110]Zhao X, Dou W, He L, et al.2013. MicroRNA-7 functions as an antimetastatic microRNA in gastric cancer by targeting insulin-like growth factor-1 receptor[J]. Oncogene, 32(11): 1363-1372.
[111]Zheng L L, Li J H, Wu J, et al.2016b. deepBasev2.0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data[J]. Nucleic Acids Research, 44(D1):D196-202.
[112]Zheng Q, Bao C, Guo W, et al.2016a. Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs[J]. Nature Communication, 7:11215.
[113]Zhong Z, Lv M, Chen J.2016. Screening differential circular RNA expression profiles reveals the regulatory role of circTCF25-miR-103a-3p/miR-107-CDK6 pathway in bladder carcinoma[J]. Scientific Reports, 6:30919.
|
|
|
|