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Enhanced Stability of Ulp1 from Saccharomyces cerevisiae S288C via SpyTag/SpyCatcher-mediated Spontaneous Cyclization |
WANG Meng-Ke*, GUO Yu-Kun*, GUO Wan-Ying, JIA Bin, ZHANG Han, GUO Yu-Jie, WANG Jiang, YANG Guo-Yu**, HAN Ying-Qian** |
College of Animal Science and Veterinary Medicine, Henan Agricultural University / Key Laboratory of Animal Biochemistry and Nutrition, Ministry of Agriculture, Zhengzhou 450002, China |
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Abstract Small ubiquitin-like modifiers (SUMOs) are widely used as labels for soluble expression of recombinant protein. Ubiquitin-like-specific protease 1 (Ulp1) is a major member of SUMOs proteases; However, its poor stability hampers its applications. Moreover, studies indicated that Ulp1 fragment from residues 304 to 621 displays full proteolytic activity in cleavage reactions. Here, a cyclized recombinant truncated Ulp1 (Gly304~Lys621) was constructed with SpyTag/SpyCatcher technology, it was observed that cyclization was efficiently and spontaneously completed under a variety of environmental conditions, resulted in strong stability and maintained enzyme catalytic activity and function. To objectively verify the effect of SpyTag/SpyCatcher technology on recombinant truncated Ulp1 stability, 3 proteases were designed in this study, including recombinant truncated Ulp1-His6 (rtUlp1), SpyTag-rtUlp1-SpyCatcher-His6 (crtUlp1) and Spy-TagΔDA-rtUlp1-SpyCatcherΔEQ-His6 (lrtUlp1). The results showed that crtUlp1 exhibited higher levels of thermostability and alkali-tolerance than the other 2 variants. Additionally, the optimal temperature of the circular variant was 5 ℃ higher than that of rtUlp1 and 10 ℃ higher than that of the linear variant. These results indicated that SpyTag/SpyCatcher-mediated cyclization increased the thermodynamic and pH stability of rtUlp1 and suggested that this technology represent a promising and effective strategy for enhancing rtUlp1 stability.
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Received: 11 August 2019
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Corresponding Authors:
**twgjl@163.com; haubiochem@163.com
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[1] Bird L E.2011. High throughput construction and small scale expression screening of multi-tag vectors in Escherichia coli[J]. Methods, 55(1): 0-37.
[2] Butt T R, Edavettal S C, Hall J P, et al.2005. SUMO fusion technology for difficult-to-express proteins[J]. Protein Expression and Purification, 43(1): 1-9.
[3] Chaga G S.2001.Twenty-five years of immobilized metal ion affinity chromatography: Past, present and future[J]. Journal of Biochemical and Biophysical Methods, 49(1-3): 313-314.
[4] Chen X, Zaro J, Shen W C.2013. Fusion Protein Linkers: Effects on Production, Bioactivity, and Pharmacokinetics[M]. John Wiley & Sons, Inc.: pp. 57-73.
[5] Chhetri G, Kalita P, Tripathi T.2015. An efficient protocol to enhance recombinant protein expression using ethanol in Escherichia coli[J]. MethodsX, 2: 385-391.
[6] Costa S, Almeida A, Castro A, et al.2014. Fusion tags for protein solubility, purification and immunogenicity in Escherichia coli: The novel Fh8 system[J]. Frontiers in Microbiology, 5: 63.
[7] Demain A L,Vaishnav P.2009. Production of recombinant proteins by microbes and higher organisms[J]. Biotechnology Advances, 27(3): 297-306.
[8] Feng X P.2009. Processing Technology Research of Fermentation and Purification of SUMO Protease UlP1[J]. China Biotechnology, 29: 81-86.
[9] Fierer J O, Veggiani G, Howarth M.2014. SpyLigase peptide-peptide ligation polymerizes affibodies to enhance magnetic cancer cell capture[J]. Proceedings of the National Academy of Sciences of the USA, 111(13): E1176-1181.
[10] Hagan R M, Bjornsson R, McMahon S A, et al.2010. NMR spectroscopic and theoretical analysis of a spontaneously formed Lys-Asp isopeptide bond[J]. Angewandte Chemie (International ed. in English), 49(45): 8421-8425.
[11] Kamionka M.2011. Engineering of therapeutic proteins production in Escherichia coli[J]. Current Pharmaceutical Biotechnology, 12(2): 268-274.
[12] Kanno A, Yamanaka Y, Hirano H, et al.2007. Cyclic luciferase for real-time sensing of caspase-3 activities in living mammals[J]. Angewandte Chemie (International ed. in English), 46(40): 7595759-9.
[13] Karimzadeh S, Moradi M, Hosseinkhani S.2012. Delicate balance of electrostatic interactions and disulfide bridges in thermostability of firefly luciferase[J]. International Journal of Biological Macromolecules, 51(5): 837-844.
[14] Laney J D, Hochstrasser M.1999. Substrate targeting in the ubiquitin system[J]. Cell, 97(4): 427-430.
[15] Lee I S, Lee N, Park J, et al.2006. Ni/NiO core/shell nanoparticles for selective binding and magnetic separation of histidine-tagged proteins[J]. Journal of the American Chemical Society, 128(33): 10658-10659.
[16] Malakhov M P, Mattern M R, Malakhova O A, et al.2004. SUMO fusions and SUMO-specific protease for efficient expression and purification of proteins[J]. Journal of Structural and Functional Genomics, 5(1-2): 75-86.
[17] Marblestone J G, Edavettal S C, Lim Y, et al.2006.Comparison of SUMO fusion technology with traditional gene fusion systems: Enhanced expression and solubility with SUMO[J]. Protein Science: A publication of the Protein Society, 15(1): 182-189.
[18] Mossessova E, Lima C D.2000. Ulp1-SUMO crystal structure and genetic analysis reveal conserved interactions and a regulatory element essential for cell growth in yeast[J]. Molecular Cell, 5(5):865-876.
[19] Mulvenna J P, Mylne J S, Bharathi R, et al.2006. Discovery of cyclotide-like protein sequences in graminaceous crop plants: Ancestral precursors of circular proteins?[J] The Plant Cell, 18(9): 2134-2144.
[20] Popp M W, Dougan S K, Chuang T Y, et al.2011. Sortase-catalyzed transformations that improve the properties of cytokines[J]. Proceedings of the National Academy of Sciences of the USA, 108(5): 3169-3174.
[21] Reddington S C, Howarth M.2015. Secrets of a covalent interaction for biomaterials and biotechnology: SpyTag and SpyCatcher[J]. Current Opinion in Chemical Biology, 29(3): 94-99.
[22] Schoene C, Bennett S P, Howarth M.2016. SpyRing interrogation: Analyzing how enzyme resilience can be achieved with phytase and distinct cyclization chemistries[J]. Scientific Reports, 6: 21151
[23] Schoene C, Fierer J O, Bennett S P, et al.2014. SpyTag/SpyCatcher cyclization confers resilience to boiling on a mesophilic enzyme[J]. Angewandte Chemie (International ed. in English), 126(24): 6101-6104.
[24] Si M, Xu Q, Jiang L, et al.2016. SpyTag/SpyCatcher Cyclization Enhances the Thermostability of Firefly Luciferase[J]. PLOS ONE, 11(9): e0162318.
[25] Sun F, Zhang W B, Mahdavi A, et al.2014. Synthesis of bioactive protein hydrogels by genetically encoded SpyTag-SpyCatcher chemistry[J]. Proceedings of the National Academy of Sciences of the USA, 111(1): 11269-11274.
[26] Wang J, Wang Y, Wang X, et al.2016a. Enhanced thermal stability of lichenase from Bacillus subtilis 168 by SpyTag/SpyCatcher-mediated spontaneous cyclization[J]. Biotechnology for Biofuels, 9(1): 79.
[27] Wang X, Zhang G.2016. Advances in protein cyclization[J]. Sheng Wu Gong Cheng Xue Bao=Chinese Journal of Biotechnology, 32(4): 430-439.
[28] Wang X, Liu H, Liu Y, et al.2016b. A Novel Strategy for the Preparation of Codon-Optimized Truncated Ulp1 and its Simplified Application to Cleavage the SUMO Fusion Protein[J]. The Protein Journal, 35(7): 115-123.
[29] Williams N K, Liepinsh E, Watt S J, et al.2005.Stabilization of native protein fold by intein-mediated covalent cyclization[J]. Journal of Molecular Biology, 346(4): 1095-1108.
[30] Xu M Q, Evans T C Jr.2001. Intein-mediated ligation and cyclization of expressed proteins[J]. Methods, 24(3): 257-277.
[31] Zakeri B, Fierer J O, Celik E, et al.2012. Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin[J]. Proceedings of the National Academy of Sciences of the USA, 109(2): E690-697.
[32] Zakeri B, Howarth M.2010. Spontaneous intermolecular amide bond formation between side chains for irreversible peptide targeting[J]. Journal of the American Chemical Society, 132(13): 4526-4527.
[33] Zhou H X.2003. Effect of backbone cyclization on protein folding stability: Chain entropies of both the unfolded and the folded states are restricted[J]. Journal of Molecular Biology, 332(1): 2572-64. |
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