|
|
Creating New Germplasm of Yellow Fruit Tomato (Solanum lycopersicum) Using CRISPR/Cas9 Technology |
LONG Hai-Cheng1,4, MA Yan-Qin1,2, ZHOU Yu-Jie1, CHANG Wei2,3, LI Ju1,2, LI Zhi1,2, MIAO Ming-Jun1,2, YANG Liang1,2,* |
1 Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province/MOA of Key Laboratory of Horticultural Crops Biology and Germplasm Enhancement in Southwest Regions, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences,Chengdu 610066, China; 2 Sichuan Province Engineering Technology Research Center of Vegetables, Pengzhou, Sichuan 611934, China; 3 Sichuan Institute of Edible Fungi, Chengdu 610066, China; 4 College of Resources, Sichuan Agricultural University, Chengdu 611130, China |
|
|
Abstract At present, excellent yellow fruit tomato (Solanum lycopersicum) varieties are relatively scarce in the domestic market. In order to meet the market demand and improve the competitiveness of the seed industry, the tomato variety 'MoneyMaker' ('MM') was used to create yellow fruit by targeted gene editing of the tomato phytoene synthase 1 (SlPSY1) using CRISPR/Cas9 technology. Two sequences specific sgRNAs in the exon region of the SlPSY1 were selected as target sites to construct the CRISPR/Cas9 binary expression vector pKSE401. The 'MM' tomato material was genetically transformed using Agrobacterium tumefaciens mediated leaf disc transformation method. The results showed that 12 transgenic-positive plants were detected in 16 regenerated seedlings, with a positive transformation rate of 75%; Sequencing analysis of the target sites of the positive transgenic plants showed that 8 plants had a total of 21 editing events at 2 target sites, with a gene editing efficiency of 66.7%, and none of them was off-target; Five of the edited plants showed yellow fruit phenotype at maturity. In this study, CRISPR/Cas9 technology was used to successfully created SlPSY1 gene editing plants in 'MM' tomato, which will provide a technical and material basis for the rapid creation of tomato yellow fruit resources in the future.
|
Received: 07 November 2023
|
|
Corresponding Authors:
* yangliang_saas@foxmail.com
|
|
|
|
[1] 杨亮, 刘欢, 李菊, 等. 2023. 利用CRISPR-Cas9技术快速创制番茄雄性不育系[J]. 分子植物育种, 21(11): 3619-3627. (Yang L, Liu H, Li J, et al.2023. Rapid breeding of tomato male sterile lines by CRISPR-Cas9 technology[J]. Molecular Plant Breeding, 21(11): 3619-3627.) [2] Al-Babili S, Hoa T T C, Schaub P.2006. Exploring the potential of the bacterial carotene desaturase CrtI to increase the beta-carotene content in Golden Rice[J]. Journal of Experimental Botany, 57(4): 1007-1014. [3] Aluru M, Xu Y, Guo R, et al.2008. Generation of transgenic maize with enhanced provitamin A content[J]. Journal of Experimental Botany, 59(13): 3551-3562. [4] Carrari F, Baxter C, Usadel B, et al.2006. Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior[J]. Plant Physiology, 142(4): 1380-1396. [5] Cazzonelli C I, Pogson B J.2010.Source to sink: Regulation of carotenoid biosynthesis in plants[J]. Trends in Plant Science, 15(5): 266-274. [6] Centeno D C, Osorio S, Nunes-Nesi A, et al.2011. Malate plays a crucial role in starch metabolism ripening and soluble solid content of tomato fruit and affects postharvest softening[J]. Plant Cell, 23(1): 162-184. [7] da Silva Souza M A, Peres L E, Freschi J R, et al.2020. Changes in flavonoid and carotenoid profiles alter volatile organic compounds in purple and orange cherry tomatoes obtained by allele introgression[J]. Journal of the Science of Food and Agriculture, 100(4): 1662-1670. [8] Fantini E, Falcone G, Frusciante S, et al.2013. Dissection of tomato lycopene biosynthesis through virus-induced gene silencing[J]. Plant Physiology, 163(2): 986-998. [9] Feng Z Y, Mao Y F, Xu N F, et al.2014. Multigeneration analysis reveals the inheritance specificity and patterns of CRISPR/Cas-induced gene modification in Arabidopsis[J]. Proceedings of the National Academy of Sciences of the USA, 111(12): 4632-4637. [10] Fraser P D, Bramley P M.2004. The biosynthesis and nutritional uses of carotenoids[J]. Progress in Lipid Research, 43(3): 228-265. [11] Fraser P D, Romer S, Shipton C A, et al.2002. Evaluation of transgenic tomato plants expressing an additional phytoene synthase in a fruit-specific manner[J]. Proceedings of the National Academy of Sciences of the USA, 99(2): 1092-1097. [12] Fray R G, Grierson D.1993. Identification and genetic analysis of normal and mutant phytoene synthase genes of tomato by sequencing, complementation and co-suppression[J]. Plant Molecular Biology, 22(4): 589-602. [13] Giuliano G.Plant carotenoids: Genomics meets multi-gene engineering[J]. Current Opinion In Plant Biology, 19: 111-117. [14] Jia H G, Wang N.2014. Targeted genome editing of sweet orange using Cas9/sgRNA[J]. PLOS ONE, 9(4): e93806. [15] Jiang W Z, Zhou H B, Bi H H, et al.2013. Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice[J]. Nucleic Acids Research, 41(20): e188. [16] Kachanovsky D E, Filler S, Isaacson T, et al.2012. Epistasis in tomato color mutations involves regulation of phytoene synthase 1 expression by cis-carotenoids[J]. Proceedings of the National Academy of Sciences of the USA, 109(46): 19021-19026. [17] Liang G, Zhang H M, Lou D J, et al.2016. Selection of highly efficient sgRNAs for CRISPR/Cas9-based plant genome editing[J]. Scientific Reports, 6(1): 21451 [18] Liu H, Ding Y D, Zhou Y Q, et al.2017. CRISPR-P 2.0: An improved CRISPR-Cas9 tool for genome editing in plants[J]. 10(3): 530-532. [19] Matsumura H, Shiomi K, Yamamoto A, et al.2020. Hybrid rubisco with complete replacement of rice rubisco small subunits by sorghum counterparts confers C4 plant-like high catalytic activity[J]. Molecular Plant, 13(11): 1570-1581. [20] Nakajima I, Ban Y, Azuma A, et al.2017. CRISPR/Cas9-mediated targeted mutagenesis in grape[J]. PLOS ONE, 12(5): e0177966. [21] Namitha K K, Negi P S.2010. Chemistry and biotechnology of carotenoids[J]. Critical Reviews in Food Science & Nutrition, 50(8): 728-760. [22] Rao A V, Rao L G.2007. Carotenoids and human health[J]. Pharmacological Research,55(3): 207-216. [23] Ruizsola M Á, Rodríguezconcepción M.2012. Carotenoid biosynthesis in Arabidopsis: A colorful pathway[J]. The Arabidopsis Book, 10: e0158. [24] Tian S W, Jiang L J, Gao Q, et al.2017. Efficient CRISPR/Cas9-based gene knockout in watermelon[J]. Plant Cell Reports, 36(3): 399-406. [25] Van Eck J, Keen P, Tjahjadi M.2019. Agrobacterium tumefaciens-mediated transformation of tomato[C]//, Kumar S, Barone P, Smith M (eds.). Transgenic Plants: Methods in Molecular Biology. Humana Press, New York, pp. 225-234. [26] Voytas D F.2013. Plant genome engineering with sequence-specific nucleases[J]. Annual Review of Plant Biology, 64: 327-350. [27] Wang S H, Zhang S B, Wang W X, et al.2015. Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system[J]. Plant Cell Reports, 34(9): 1473-1476. [28] Wang Y P, Cheng X, Shan Q W, et al.2014. Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew[J]. Nature Biotechnology, 32(9): 947-951. [29] Zhu H C, Li C, Gao C, et al.2020. Applications of CRISPR-Cas in agriculture and plant biotechnology[J]. Nature Reviews Molecular Cell Biology, 21(12): 661-677. |
|
|
|