|
|
Establishment of One Step qRT-PCR Detection Assays for Bluetongue virus Serotype 25, 26 and 27 |
LI Zhuo-Ran1,*, SONG Zi-Ang2,*, LI Zhan-Hong1, YANG Zhen-Xing1, YANG Heng1,**, LIAO De-Fang1,** |
1 Yunnan Tropical and Subtropical Animal Virology Laboratory, Yunnan Academy of Animal Husbandry and Veterinary, Kunming 650224, China; 2 College of Veterinary Medicine, Yunnan Agricultural University, Kunming 650224, China |
|
|
Abstract Bluetongue virus (BTV) is an arbovirus that seriously endangers ruminants. Since 2008, 3 new serotypes of BTV-25, -26 and -27 have been discovered in the worldwide, and China is also threatened by the invasion of BTV-25, -26 and -27. The DNA sequences of BTV-25, -26 and -27 genomic segment 2 (Seg-2) with lengths of about 500 bp were synthesized and transcribed into single strand RNA (ssRNA) in vitro using as the reference nucleic acids. Serotype specific amplification primers and TaqMan probes were designed based on Seg-2 sequences of BTV-25, -26 and -27 and the one step qRT-PCR detection assays were established. The results showed that the reference nucleic acids of BTV-25, -26 and -27 were successfully obtained; The established BTV-25, -26 and -27 serotype specific one step qRT-PCR detection assays possessed strong specificity, high sensitivity and good repeatability, which did not cross-react with other BTV serotype virus, Epizootic haemorrhagic disease virus, Akabane virus and African horse sickness virus inactivated vaccine virus;and that showed the minimum ssRNA template detection limits of 4.43×101, 5.61×101 and 4.88×101 copies/μL for BTV-25, -26 and BTV-27 ssRNA, respectively; and displayed the intra- and inter-group coefficient of variation varying between 0.48% and 1.79%. To determine the presence of BTV-25, -26 and -27 infection, 120 BTV nucleic acid positive animal blood samples collected from southern China were tested, and the results were all negative, representing none of the animals were infected by BTV-25, -26 and -27. This study successfully established the one step qRT-PCR detection assays of BTV-25, -26 and -27, and provides an effective technical means for the monitoring of new serotype BTV intrusion into China.
|
Received: 02 December 2019
|
|
Corresponding Authors:
**, yangheng2008.cool@163.com; wenjie3@hotmail.com
|
About author:: * The authors who contribute equally |
|
|
|
[1] 曹颖颖, 吴建敏, 林俊, 等. 2015. 广西首例牛源鹿流行性出血热病毒的分离鉴定[J]. 中国预防兽医学报, 37(10): 746-750. (Cao Y Y, Wu J M, Lin J, et al.2015. Isolation and identification of the first case of epizootic hemorrhagic disease virus from cattle in Guangxi[J]. Chinese Journal of Preventive Veterinary Medicine, 37(10): 746-750.) [2] 寇美玲, 苗海生, 杨恒, 等. 2018. 2013-2016年云南省江城县牛羊蓝舌病血清流行病学调查[J]. 中国动物检疫, 35(12): 5-9. (Kou M L, Miao H S, Yang H, et al.2018. Serological investigation of bluetongue in cattle and goats in Jiangcheng County of Yunnan Province during 2013 to 2016[J]. China Animal Health Inspection, 35(12): 5-9.) [3] 李占鸿, 王金萍, 杨恒, 等. 2019a. 蓝舌病病毒血清9型毒株在我国的首次分离[J]. 畜牧兽医学报, 50(2): 354-363. (Li Z H, Wang J P, Yang H, et al.2019a. Isolation of Bluetongue virus serotype 9 in China for the first time[J]. Acta Veterinaria et Zootechnica Sinica, 50(2): 354-363.) [4] 李占鸿, 肖雷, 杨振兴, 等. 2019b. 牛源流行性出血病病毒(EHDV)血清10型毒株在我国的分离鉴定[J]. 病毒学报, 35(1): 112-120. (Li Z H, Xiao L, Yang Z X, et al.2019b. Isolation and identification fo the epidemic hemorrhagic fever virus serotype 10 strain from cattle in China[J]. Chinese Journal of Virology, 35(1): 112-120.) [5] 吕敏娜, 朱建波, 李娟, 等. 2017. 广东一株牛源流行性出血病病毒的分离鉴定[J]. 中国预防兽医学报, 39(1): 67-70. (Lv M N, Zhu J B, Li J, et al.2017. Isolation and identification of the epizootic hemorrhagic disease virus from cattle in Guangdong[J]. Chinese Journal of Preventive Veterinary Medicine, 39(1): 67-70.) [6] 孟锦昕, 何于雯, 肖雷, 等. 2018. 云南省师宗县牛羊蓝舌病病毒感染情况及活动规律监测[J]. 中国人兽共患病学报, 34(6): 537-541. (Meng J X, He Y W, Xiao L, et al.2018. Dynamic monitoring and infection on Bluetongue virus in cattle and goats in Shizong County, Yunnan[J]. Chinese Journal of Zoonoses, 34(6): 537-541.) [7] 千莎莎, 何彪, 涂忠忠, 等. 2015. 委内瑞拉马脑炎病毒一步法荧光定量RT-PCR方法的建立[J]. 病毒学报, 31(2) :107-113. (Qian S S, He B, Tu Z Z, et al.2015. Establishment of a one-step real-time RT-PCR method for the detetion of venezuelan equine encephalitis virus[J]. Chinese Journal of Virology, 31(2) :107-113.) [8] 杨振兴, 孟锦昕, 肖雷, 等. 2019. 流行性出血病病毒(EHDV)血清7型毒株在中国的首次分离与鉴定[J]. 畜牧兽医学报, 50(3): 602-610. (Yang Z X, Meng J X, Xiao L, et al.2019. Isolation of epizootic heamorrhagic disease virus serotype 7 strain in China for the first time[J]. Acta Veterinaria et Zootechnica Sinica, 50(3): 602-610.) [9] Alahi M E E, Mukhopadhyay S C.2017. Detection methodologies for pathogen and toxins: A review[J]. Sensors, 17(8): 1885. [10] Batten C A, Henstock M R, Bin-Tarif A, et al.2012. Bluetongue virus serotype 26: Infection kinetics and pathogenesis in Dorset Poll sheep[J]. Veterinary Microbiology, 157(1-2): 119-124. [11] Batten C A, Henstock M R, Steedman H M, et al.2013. Bluetongue virus serotype 26: Infection kinetics, pathogenesis and possible contact transmission in goats[J]. Veterinary Microbiology, 162(1): 62-67. [12] Batten C, Darpel K, Henstock M, et al.2014. Evidence for transmission of Bluetongue virus serotype 26 through direct contact[J]. PLOS ONE, 9(5): e96049. [13] Breard E, Schulz C, Sailleau C, et al.2017. Bluetongue virus serotype 27: Experimental infection of goats, sheep and cattle with three BTV-27 variants reveal atypical characteristics and likely direct contact transmission BTV-27 between goats[J]. Transboundary and Emerging Diseases, 65(2): 1-13. [14] Carpenter S, Wilson A, Mellor P S.2009. Culicoides and the emergence of Bluetongue virus in northern Europe[J]. Cell, 17(4): 172-178. [15] Carpenter S, Groschup M H, Garros C, et al.2013. Culicoides biting midges, arboviruses and public health in Europe[J]. Antiviral Research, 100(1): 102-113. [16] Gong Z D, Shen X Y, Liang H Q, et al.2020. TaqMan probe qRT-PCR detects bovine parvovirus and applies clinically[J]. Turkish Journal of Veterinary and Animal Sciences, 364-369. [17] Hofmann M A, Renzullo S, Mader M, et al.2008. Genetic characterization of Toggenburg Orbivirus, a new Bluetongue virus, from goats, Switzerland[J]. Emerging Infectious Diseases, 14(12): 1855-1861. [18] Ibrahim Z, Rose J A, Tsuboi Y, et al.2006. A new readout approach in DNA computing based on real-time PCR with TaqMan probes[C]//, International Workshop on DNA-based computers. Springer, Berlin, Heidelberg, pp. 350-359. [19] Maan S, Maan N S, Samuel A R, et al.2007. Analysis and phylogenetic comparisons of full-length VP2 genes of the 24 Bluetongue virus serotypes[J]. Journal of General Virology, 88(Pt 2): 621-630. [20] Maan S, Maan N S, Ross-smith N, et al.2008. Sequence analysis of Bluetongue virus serotype 8 from the Netherlands 2006 and comparison to other European strains[J]. Virology, 377(2): 308-318. [21] Maan S, Maan N S, Nomikouet K, et al.2011. Novel Bluetongue virus serotype from Kuwait[J]. Emerging Infectious Diseases, 17(5): 886-889. [22] Maan S, Maan N S, Belaganahalli M N, et al.2016. Development and evaluation of real time RT-PCR assays for detection and typing of Bluetongue virus[J]. PLOS ONE, 11(9): e0163014. [23] Maclachlan N J.2011. Bluetongue history, global epidemiology, and pathogenesis[J]. Preventive Veterinary Medicine, 102(2): 107-111. [24] Mulholland C, McMenamy M J, Hoffmann B, et al.2017. The development of a real-time reverse transcription-polymerase chain reaction (rRT-PCR) assay using TaqMan technology for the pan detection of Bluetongue virus (BTV)[J]. Journal of Virological Methods, 245: 35-39. [25] Planzer J, Kaufmann C, Worwa G, et al.2011. In vivo and in vitro propagation and transmission of Toggenburg Orbivirus[J]. Research in Veterinary Science, 91(3): e163-168. [26] Pozzo F D, Clercq K D, Guyot H, et al.2009. Experimental reproduction of Bluetongue virus serotype 8 clinical disease in calves[J]. Veterinary Microbiology, 136(3-4): 352-358. [27] Qin S M, Yang H, Zhang Y X, et al.2018. Full genome sequence of the first Bluetongue virus serotype 21 (BTV-21) isolated from China: Evidence for genetic ressortment between BTV-2 and Bluetongue virus serotype 16 (BTV-16)[J]. Archives of Virology, 163(5): 1379-1382. [28] Saegerman C, Berkvens D, Mellor P S.2008. Bluetongue epidemiology in the European Union[J]. Emerging Infectious Diseases, 14(4): 539-544. [29] Savini G, Puggioni G, Meloni G, et al.2017. Novel putative Bluetongue virus in healthy goats from Sardinia, Italy[J]. Infection, Genetics and Evolution, 51: 108-117. [30] Schwartz-Cornil I, Mertens P P C, Contreras V, et al.2008. Bluetongue virus: Virology, pathogenesis and immunity[J]. Veterinary Research, 39(5): 46-62. [31] Sun E C, Huang L P, Xu Q Y, et al.2014. Emergence of a novel Bluetongue virus serotype, China 2014[J]. Transboundary and Emerging Diseases, 63(6): 1-5. [32] Vogtlin A, Hofmann M A, Nenniger C, et al.2013. Long-term infection of goats with Bluetongue virus serotype 25[J]. Veterinary Microbiology, 166(1-2): 165-173. [33] Yang H, Zhu J B, Li H C, et al.2012. Full genome sequence of Bluetongue virus serotype 4 from China[J]. Journal of Virology, 86(23): 13122-13123. [34] Yang H, Xiao L, Wang J L, et al.2017. Phylogenetic characterization genome segment 2 of Bluetongue virus strains belonging to serotype 5, 7 and 24 isolated for the first time in China during 2012 to 2014[J]. Transboundary and Emerging Diseases, 64(4): 1317-1321. [35] Zhou X R, Zhang T S, Song D P, et al.2017. Comparison and evaluation of conventional RT-PCR, SYBR green Ⅰ and TaqMan real-time RT-PCR assays for the detection of porcine Epidemic diarrhea virus[J]. Molecular and Cellular Probes, 33: 36-41. [36] Zhu J B, Yang H, Li H C, et al.2013. Full-genome sequence of Bluetongue virus serotype 1 (BTV-1) strain Y863, the first BTV-1 isolate of Eastern origin found in China[J]. Genome Announcements, 1(4): e00403-13. [37] Zientara S, Sailleau C, Viarouge C, et al.2014. Novel Bluetongue virus in goats, Corsica, France, 2014[J]. Emerging Infectious Diseases, 20(12): 2123-2125. |
|
|
|